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Protein Alignment CG31296 and R3hdml
DIOPT Version :9
Sequence 1: | NP_001262608.1 |
Gene: | CG31296 / 318668 |
FlyBaseID: | FBgn0051296 |
Length: | 280 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001102432.1 |
Gene: | R3hdml / 366245 |
RGDID: | 1305296 |
Length: | 253 |
Species: | Rattus norvegicus |
Alignment Length: | 175 |
Identity: | 37/175 - (21%) |
Similarity: | 60/175 - (34%) |
Gaps: | 40/175 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 91 SRLSYSMELEDLARLAVITCSTHKFCL----NSQEFYYVGTNIGSTHYLGNLNDYEDLELMLRII 151
|.:.|.:..|.|||.|....:. |: .||...|||.|: |.| .|......|| :
Rat 82 SNMEYMVWDEQLARAAEAWATQ---CIWAHGPSQLTKYVGQNL-SVH-SGRYRSVVDL------V 135
Fly 152 QHWT---RYADYVNIK-MGVYMPTTLGKSGIAKALLLMADRNTHVGC------------SAMRFT 200
:.|: |:..:...| ...:.|........:....::...::.:|| |..:..
Rat 136 KSWSEEKRHYSFPAPKDCTPHCPWLCSGPVCSHYTQMVWASSSRLGCAIHTCSSINVWGSTWQQA 200
Fly 201 VHSVHNFVFLCAFSTDLFVERPIYRMSMRPGAACKRLDPTYSALC 245
|:.|.|: |...:...|.| .:.|..|....|:|...|
Rat 201 VYLVCNY----AIKGNWIGEAP-----YKTGKPCSACPPSYQGNC 236
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG31296 | NP_001262608.1 |
SCP_euk |
61..214 |
CDD:240180 |
30/142 (21%) |
R3hdml | NP_001102432.1 |
SCP |
65..207 |
CDD:294090 |
28/135 (21%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG2340 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1528782at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR10334 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.920 |
|
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