DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG31296 and Clec18a

DIOPT Version :9

Sequence 1:	NP_001262608.1	Gene:	CG31296 / 318668	FlyBaseID:	FBgn0051296	Length:	280	Species:	Drosophila melanogaster
Sequence 2:	XP_038954171.1	Gene:	Clec18a / 307851	RGDID:	1559899	Length:	497	Species:	Rattus norvegicus

Alignment Length:	160	Identity:	33/160 - (20%)
Similarity:	60/160 - (37%)	Gaps:	33/160 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly    63 LLLIAFNEFRNYTASGKQKYLKAAAARMSRLSYSMELEDLARLAVITCSTHKFCLNSQEFYYVGT 127
            |:|...|..|:        .:..:||.|.|:.:|..|..||:.....|.|.           ...
  Rat    77 LILTTHNRLRS--------QVHPSAANMQRMDWSESLAQLAQARAALCGTS-----------ATP 122

  Fly   128 NIGSTHYLGNLNDYE-DLELM-------LRIIQHWTRYADYVNIKMGVYMPTTLGKSGIAKALLL 184
            |:.:|  |.|..|.. :::|:       :.::..|  :|:.:..:.|  .......:..|....|
  Rat   123 NLAAT--LRNTPDVGWNVQLLPMGSASFVEVVNVW--FAEGLQYRHG--SAECAHNATCAHYTQL 181

  Fly   185 MADRNTHVGCSAMRFTVHSVHNFVFLCAFS 214
            :...::.:||......|..|....|:||:|
  Rat   182 VWATSSQLGCGWQPCFVDQVATEAFVCAYS 211

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG31296	NP_001262608.1	SCP_euk	61..214	CDD:240180	32/158 (20%)
Clec18a	XP_038954171.1	CAP_euk	77..211	CDD:349399	32/158 (20%)
Clec18a	XP_038954171.1	CLECT	361..485	CDD:153057
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1528782at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010