DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31296 and Pi16

DIOPT Version :10

Sequence 1:NP_732044.2 Gene:CG31296 / 318668 FlyBaseID:FBgn0051296 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_001163952.1 Gene:Pi16 / 294312 RGDID:1304760 Length:483 Species:Rattus norvegicus


Alignment Length:156 Identity:29/156 - (18%)
Similarity:58/156 - (37%) Gaps:41/156 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IFVALLNFIPFG-------------CSKLVDFCQLPYCGTNNLAC---NNPSKFSVMCPPNARTL 55
            |.:.:.|:.|.|             ||:    |.|.|...|:| |   ..|.| :...||....:
  Rat   164 IHLLVCNYEPPGNVKGRKPYQEGTPCSQ----CPLGYSCVNSL-CEPERKPEK-AQDSPPRVTEV 222

  Fly    56 SMSTYRNLLLIAFNEFRNYTASGKQKYLKAAAARMSRLSYSM------ELEDLARLAVITCSTHK 114
            ..|....:..:|.:|..::::             ::::|.|:      .:|..|..::.|.....
  Rat   223 PGSRETGIPSLATSESLHFSS-------------VTKVSDSLATEPSPAVETKAPPSLATEGPSS 274

  Fly   115 FCLNSQEFYYVGTNIGSTHYLGNLND 140
            ....:|.|.....::.:||...:|::
  Rat   275 MATEAQSFLTEVPSVSATHIQPSLDE 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31296NP_732044.2 CAP_euk 61..214 CDD:349399 12/86 (14%)
Pi16NP_001163952.1 CAP_PI16_HrTT-1 39..172 CDD:349405 2/7 (29%)
PHA03247 <205..459 CDD:223021 17/110 (15%)

Return to query results.
Submit another query.