DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31296 and scl-11

DIOPT Version :9

Sequence 1:NP_001262608.1 Gene:CG31296 / 318668 FlyBaseID:FBgn0051296 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_502499.1 Gene:scl-11 / 186050 WormBaseID:WBGene00009892 Length:207 Species:Caenorhabditis elegans


Alignment Length:233 Identity:51/233 - (21%)
Similarity:85/233 - (36%) Gaps:65/233 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 VMCPPNARTLSMSTYRNLLLIAFNEFRN------YTASG-KQKYLKAAAARMSRLSYSMELEDLA 103
            |.|.....:...||.:..::.|.|:.|:      |.|.| .||    :.:.|.::.:...:...|
 Worm     8 VCCIAGVFSQFTSTGQQAIVDAHNKLRSSIAKGTYVAKGTTQK----SGSNMRKIKWDATVATSA 68

  Fly   104 RLAVITCSTHKFCLNSQEFYYVGTNIGSTHY-------LGNLNDYE-------DLELMLRIIQH- 153
            :....||.|.    :||     |:..|...|       :|||:.:.       :.|..    |: 
 Worm    69 QNYANTCPTG----HSQ-----GSGYGENLYWYWTSGTIGNLDTFGPAASSSWESEFQ----QYG 120

  Fly   154 WTRYADYVNIKMGVYMPTTLGKSGIAKALLLMADRNTH-VGCSAM---RFTVHSVHNFVFLCAFS 214
            ||..    .:.|..:      .:||..| ..||..||. :||...   :...:..:....:|.:.
 Worm   121 WTSN----TLDMNTF------NTGIGHA-TQMAWANTFAIGCGVKNCGKDPSNGYNKVAVVCQYK 174

  Fly   215 T-DLFVERPIYRM-----SMRPGAACKRLDPTYSALCA 246
            | ..::.:|||:.     :...|.||..     |.|||
 Worm   175 TPGNYLNQPIYQQGTTCAACPSGTACDS-----SGLCA 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31296NP_001262608.1 SCP_euk 61..214 CDD:240180 36/178 (20%)
scl-11NP_502499.1 SCP 21..173 CDD:214553 37/179 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

Return to query results.
Submit another query.