DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31296 and LOC100490275

DIOPT Version :9

Sequence 1:NP_001262608.1 Gene:CG31296 / 318668 FlyBaseID:FBgn0051296 Length:280 Species:Drosophila melanogaster
Sequence 2:XP_031754789.1 Gene:LOC100490275 / 100490275 -ID:- Length:291 Species:Xenopus tropicalis


Alignment Length:229 Identity:58/229 - (25%)
Similarity:88/229 - (38%) Gaps:47/229 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 PSKFSVMCPPNARTLSMS-TYRNL-----LLIAFNEFRNYTASGKQKYLKAAAARMSRLSYSMEL 99
            |....|:....||.|..: .|.|.     |:.|.|:.||  ..|||      ||.|..:|:.:.|
 Frog     4 PQLMLVVSVCGARQLDPTPAYNNERFVTDLVNAHNDIRN--EFGKQ------AANMLHMSWDVGL 60

  Fly   100 EDLARLAVITC----STHKFCLNSQEFYYVGTNIGSTHYLGNLNDYEDLELMLRIIQHWTRYADY 160
            ..||:...|.|    :.|   ||.:..|.....||...|:|...|      :.:|:.:|....::
 Frog    61 AKLAQAWTINCKKVPNPH---LNKESIYPRFKQIGENLYMGPSID------IFKIVTNWGLEGNF 116

  Fly   161 VNIKMGVYMPTTLGKSGIAKALLLMADRNTH-VGCSAMRFTVHSVHNFVFLCAFST--DLFVERP 222
            .::|.....|   ||.......::.|  ||: |||.| .:..|.| .:|..|.:..  :|..:.|
 Frog   117 YDLKNNSCQP---GKDCSHFTQIVWA--NTYKVGCGA-AYCAHKV-AYVVSCTYGPRGNLLGQVP 174

  Fly   223 IYRMSMRPGAACKRLDPTYSALCAVG-----ENY 251
            ...     |..|.:.......:.:.|     |||
 Frog   175 FIL-----GVKCSKCGGEKCNVASCGNPSRDENY 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31296NP_001262608.1 SCP_euk 61..214 CDD:240180 44/162 (27%)
LOC100490275XP_031754789.1 CAP 28..167 CDD:412178 43/162 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.