DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31294 and Stip1

DIOPT Version :10

Sequence 1:NP_732055.1 Gene:CG31294 / 318666 FlyBaseID:FBgn0051294 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_620266.1 Gene:Stip1 / 192277 RGDID:621599 Length:543 Species:Rattus norvegicus


Alignment Length:263 Identity:54/263 - (20%)
Similarity:96/263 - (36%) Gaps:85/263 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LNQRSLLMDVMKQLEDLQNANKMDTGTKGKEEKKPEVDPSEGVTITNFMVFARDVRKKSSRYLKR 72
            |.::.|..|..|: :|...|.|       ..:|..|:||:....|||    ...|..:...|.|.
  Rat   226 LKEKELGNDAYKK-KDFDKALK-------HYDKAKELDPTNMTYITN----QAAVHFEKGDYNKC 278

  Fly    73 VQKMSNINQISFMRQIDVSPKDRAEARRDREIVADSFRRLGNEEYRRTNYEKAVYFYSKA----- 132
            .:...        :.|:|..::|.:.|:    :|.::.|:||..::...|:.|::||:|:     
  Rat   279 RELCE--------KAIEVGRENREDYRQ----IAKAYARIGNSYFKEERYKDAIHFYNKSLAEHR 331

  Fly   133 --------------------IQYV------------------ADSP-----------------VL 142
                                :.|:                  .|.|                 .|
  Rat   332 TPDVLKKCQQAEKILKEQERLAYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPRDAKL 396

  Fly   143 YCNRALAKIKKRDFKLALFDLDYVIFNLDPIHLRAWLYRAGALARLNNESEFEIAIANARLLNRS 207
            |.|||....|..:|:|||.|.:..| .|:|..::.:..:|.||..:.:.::.......|..|:.|
  Rat   397 YSNRAACYTKLLEFQLALKDCEECI-QLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSS 460

  Fly   208 QKD 210
            .|:
  Rat   461 CKE 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31294NP_732055.1 NlpI <106..>199 CDD:443815 29/152 (19%)
TPR repeat 106..134 CDD:276809 9/52 (17%)
TPR repeat 139..170 CDD:276809 13/47 (28%)
Stip1NP_620266.1 TPR 1 4..37
3a0801s09 <7..532 CDD:273380 54/263 (21%)
TPR repeat 7..32 CDD:276809
TPR repeat 37..67 CDD:276809
TPR 2 39..71
TPR repeat 72..100 CDD:276809
TPR 3 73..105
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 191..233 2/6 (33%)
Bipartite nuclear localization signal. /evidence=ECO:0000255 222..239 4/13 (31%)
TPR 4 225..258 11/39 (28%)
TPR repeat 229..253 CDD:276809 7/31 (23%)
TPR repeat 258..288 CDD:276809 7/41 (17%)
TPR 5 260..292 8/43 (19%)
TPR 6 300..333 9/32 (28%)
TPR repeat 300..328 CDD:276809 9/27 (33%)
TPR 7 360..393 2/32 (6%)
TPR repeat 364..388 CDD:276809 2/23 (9%)
TPR repeat 393..423 CDD:276809 12/30 (40%)
TPR 8 395..427 14/32 (44%)
TPR 9 428..461 5/32 (16%)
TPR repeat 428..456 CDD:276809 4/27 (15%)
Blue background indicates that the domain is not in the aligned region.

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