DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31286 and R3hdml

DIOPT Version :10

Sequence 1:NP_731103.1 Gene:CG31286 / 318662 FlyBaseID:FBgn0051286 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_001102432.1 Gene:R3hdml / 366245 RGDID:1305296 Length:253 Species:Rattus norvegicus


Alignment Length:132 Identity:32/132 - (24%)
Similarity:44/132 - (33%) Gaps:49/132 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 HGVPKLT--LDNVLSKGCQSY--------AWKLSKSATLNYSDPTNKDYTES---ICRFEVKRGA 94
            ||..:||  :...||.....|        :|...|.   :||.|..||.|..   :|.       
  Rat   108 HGPSQLTKYVGQNLSVHSGRYRSVVDLVKSWSEEKR---HYSFPAPKDCTPHCPWLCS------- 162

  Fly    95 LSRCVKNWYNGRKFDILDPKAKDFTAMIWRSSVSLG---YGDANINA-----LQGVFVV-RYTPP 150
                             .|....:|.|:|.||..||   :..::||.     .|.|::| .|...
  Rat   163 -----------------GPVCSHYTQMVWASSSRLGCAIHTCSSINVWGSTWQQAVYLVCNYAIK 210

  Fly   151 GN 152
            ||
  Rat   211 GN 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31286NP_731103.1 CAP_GAPR1-like 32..153 CDD:349401 32/132 (24%)
R3hdmlNP_001102432.1 CAP_R3HDML 63..208 CDD:349409 29/126 (23%)

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