DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31286 and vap-2

DIOPT Version :10

Sequence 1:NP_731103.1 Gene:CG31286 / 318662 FlyBaseID:FBgn0051286 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_001300377.1 Gene:vap-2 / 181273 WormBaseID:WBGene00011462 Length:507 Species:Caenorhabditis elegans


Alignment Length:167 Identity:39/167 - (23%)
Similarity:63/167 - (37%) Gaps:31/167 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ISEFDRNFAINHDNAGIVLREINKRRDRHG-----------VPKLTLDNVLSKGCQSYAWKLSKS 68
            :|:..|||.:...|  .....:.|..:.:|           :.|:..|.:|.:..|::|.....:
 Worm   311 VSDVTRNFTLEQHN--FYRSRLAKGFEWNGETNTSQPKASQMIKMEYDCMLERFAQNWANNCVFA 373

  Fly    69 ATLNYSDPTNKD--YTESICRFEVKRGALSRCVKNWYN-----GRKFD-ILDPKAKD-------- 117
            .:.:|..|....  |..|....: .|..:...|:.|:.     |...| :|.|:..|        
 Worm   374 HSAHYERPNQGQNLYMSSFSNPD-PRSLIHTAVEKWWQELEEFGTPIDNVLTPELWDLKGKAIGH 437

  Fly   118 FTAMIWRSSVSLGYGDANINALQGVFVVRYTPPGNVK 154
            :|.|.|..:..||.|.||...:..| |..|.|.||.|
 Worm   438 YTQMAWDRTYRLGCGIANCPKMSYV-VCHYGPAGNRK 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31286NP_731103.1 CAP_GAPR1-like 32..153 CDD:349401 32/147 (22%)
vap-2NP_001300377.1 SCP 104..253 CDD:214553
SCP 315..468 CDD:214553 34/156 (22%)
Blue background indicates that the domain is not in the aligned region.

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