DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12121 and Tmem87b

DIOPT Version :9

Sequence 1:NP_572545.1 Gene:CG12121 / 31866 FlyBaseID:FBgn0030109 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_001178783.1 Gene:Tmem87b / 362212 RGDID:1307907 Length:555 Species:Rattus norvegicus


Alignment Length:410 Identity:85/410 - (20%)
Similarity:162/410 - (39%) Gaps:62/410 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 NPFP---------HE--GDSEEDSY--GPDSFKQSQENL-CKDSTMPLVRETINNV------HYY 373
            |.:|         ||  .|.:..:|  ..|.:....||| |...:...  .::||.      :..
  Rat   100 NEYPELEEELFQKHELHADGDVCAYFKNIDCWTTKSENLDCSSDSQAF--PSLNNKELTGIRNIS 162

  Fly   374 SFNFSMMVATPSDEGLYNLYFHACPNYHTSKIMSFNVDIEENNNGNYLSAGEMPLPALYFMMSLL 438
            |...||.|...:.:..::::..:.....|..|...||.:.......|:||.:.||...|.:|.::
  Rat   163 SQEGSMDVVARTQKDGFHIFIVSIKTEKTDAIWDLNVSLSMVGPHGYISASDWPLMIFYMVMCIV 227

  Fly   439 FFLSGLFWVFILKKSKHTVYKIHYLMAVLVFLKSL-SLMFHSINYHFIEKRGEHVETWAILYYIA 502
            :.|.|:.|:.........:.:|.:.:|.::||..| ..:|:| .|..|...|...:...|...:.
  Rat   228 YILYGVLWLLWSACYWKDILRIQFWIAAVIFLGMLEKAVFYS-EYQNINSTGLSTQGLLIFAELI 291

  Fly   503 HLLKGAVLFITIVLIGTGWTFIKHILSDKDKKIF---MIVIPLQVLANVAQIITDESDQSDAEFR 564
            ..||..:..:.::::..|:..:|..|.....::.   ::.:....:..|.::|....        
  Rat   292 SALKRTLARLLVIIVSLGYGIVKPRLGTVMHRVIGLGLLYLIFAAIEGVMRVIGGSK-------- 348

  Fly   565 TWHNIFFFVDLLCCGAILFPI-VWSIRHLHEASATDGKAAINLR----KLKLFRQFYIMIVCYIY 624
              |......|::.  |::..| ||.|    ..|.......:.||    |..|:|.|...::..:.
  Rat   349 --HLAVALTDIVL--AVIDSISVWFI----FISLAQTMKTLRLRKNTVKFSLYRHFTNTLIFAVL 405

  Fly   625 FTRIIVDLLQMTVVFQYA---------WLDEMFREMATYVFFVLTGYKFRP-VSSHPYFTVPDED 679
            .:  ||.::..|..|:.|         |:|:.|......:..::..:.:|| .::..|..:|..|
  Rat   406 AS--IVFMVWTTKTFRIAKCQSDWMELWVDDAFWSFLFSLILIVIMFLWRPSANNQRYAFMPLID 468

  Fly   680 EDDDEVE--VLTESGLTETV 697
            :.|||||  ::|...|||.:
  Rat   469 DSDDEVEEFMVTSENLTEGI 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12121NP_572545.1 Spore_coat_CotO 194..>290 CDD:290858
Neuromodulin 195..353 CDD:284117 7/36 (19%)
Lung_7-TM_R 387..671 CDD:284280 56/302 (19%)
Tmem87bNP_001178783.1 Lung_7-TM_R 175..459 CDD:369089 56/302 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337138
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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