DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31274 and lrmda

DIOPT Version :10

Sequence 1:NP_732186.1 Gene:CG31274 / 318655 FlyBaseID:FBgn0051274 Length:280 Species:Drosophila melanogaster
Sequence 2:XP_031761589.1 Gene:lrmda / 100491555 XenbaseID:XB-GENE-954850 Length:267 Species:Xenopus tropicalis


Alignment Length:191 Identity:54/191 - (28%)
Similarity:78/191 - (40%) Gaps:29/191 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 ESILEDNGRISLAYENLKTIPRRLADKFAAQTKFLDLSHNDFRNLRFLSFFEDLDTLILDRNVNL 144
            |.::.|. :||...::...||..|:.|:....|.||||.|..|.|..|..|..|:.||||.|...
 Frog     6 EPVVTDT-QISYIGKDCTKIPSFLSRKYGHLAKRLDLSFNLLRTLDGLEGFSCLEELILDNNQLD 69

  Fly   145 DINTFPYLPSLRILWINNCDIANITDWIHRIERHCPALDQLSCMGNPGIRTVFGG--------QG 201
            |..:||.||.|..|.:|...:.::...:..:....|.|:.||.:||.........        |.
 Frog    70 DHVSFPPLPKLHTLTVNKNQLTDLESLLDTLASVAPVLEYLSLLGNQACPNELVSPEKDEDDYQR 134

  Fly   202 PREYILQVLPQLKYLDGLPTSRNAAYATLSSSQGQGPDSTSNSEKPPLASAFTFKDIIRPK 262
            .|.::|..||.||:||....:|                    .|:....|...|..|::||
 Frog   135 YRYFVLNKLPNLKFLDARKVTR--------------------KEQEVAVSRGAFMKIVKPK 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31274NP_732186.1 LRR 1..>190 CDD:443914 36/109 (33%)
leucine-rich repeat 111..132 CDD:275378 10/20 (50%)
LRR_9 <114..217 CDD:405295 36/110 (33%)
leucine-rich repeat 133..154 CDD:275378 10/20 (50%)
leucine-rich repeat 155..181 CDD:275378 3/25 (12%)
lrmdaXP_031761589.1 leucine-rich repeat 37..57 CDD:275378 10/19 (53%)
LRR_9 <39..162 CDD:405295 40/142 (28%)
leucine-rich repeat 58..79 CDD:275378 10/20 (50%)
leucine-rich repeat 80..102 CDD:275378 3/21 (14%)
leucine-rich repeat 107..145 CDD:275378 9/37 (24%)

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