DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31269 and Su(var)3-9

DIOPT Version :10

Sequence 1:NP_001097818.1 Gene:CG31269 / 318653 FlyBaseID:FBgn0051269 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster


Alignment Length:195 Identity:38/195 - (19%)
Similarity:59/195 - (30%) Gaps:67/195 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 GTNKYNQPG--GRYFLKAIHI-HCNYDNPEMHNDIALLELVEPIAWDERTQPIPLPLVPMQPGDE 155
            |:....:|.  |...||::.| ...:...:...|:||.|        :|...:..|..|::..:.
  Fly   324 GSRSQREPQKIGERALKSMQIKRAQFVRRKQLADLALFE--------KRMNHVEKPSPPIRVENN 380

  Fly   156 VILTGWGSTVLWGTSPIDLQVLYL------QYVPHRE-----CKALLSNDEDCDVGHICTFSRLG 209
            :.|           ..||...:|:      :.||..|     ||. ..:.|:|.....|.....|
  Fly   381 IDL-----------DTIDSNFMYIHDNIIGKDVPKPEAGIVGCKC-TEDTEECTASTKCCARFAG 433

  Fly   210 E-------------------------GACHGDSGGPLVSNGYLVGLV--------NWGWPCATGV 241
            |                         .:|.......||.:|..|.||        .||...||.:
  Fly   434 ELFAYERSTRRLRLRPGSAIYECNSRCSCDSSCSNRLVQHGRQVPLVLFKTANGSGWGVRAATAL 498

  Fly   242  241
              Fly   499  498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31269NP_001097818.1 Tryp_SPc 38..258 CDD:238113 38/195 (19%)
Su(var)3-9NP_524357.2 PTZ00327 11..>80 CDD:240362
Chromo 219..268 CDD:459793
SET_SUV39H 388..634 CDD:380940 22/112 (20%)
Blue background indicates that the domain is not in the aligned region.

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