DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr8a and Gr98d

DIOPT Version :9

Sequence 1:NP_511097.3 Gene:Gr8a / 31865 FlyBaseID:FBgn0030108 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_733214.1 Gene:Gr98d / 43309 FlyBaseID:FBgn0046885 Length:412 Species:Drosophila melanogaster


Alignment Length:430 Identity:87/430 - (20%)
Similarity:166/430 - (38%) Gaps:113/430 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 HLRLYQVLGFHGLPLPGDGNPARTRRR---LMAWSLFLLISLSALVLACLFSGEEFLYRGDMFGC 73
            ::::|.:.|... |:.........|||   ::.::.: |||:|.:|:...::....|.:......
  Fly    15 YIQIYSIFGLTP-PIQFFTRTLHKRRRGIVILGYACY-LISISLMVIYECYANIVALQKDIHKFH 77

  Fly    74 ANDALK-------------YVFAELGVL-------AIY---------LETLSS----QRHLANFW 105
            |.|:.|             :|:.:|.:|       .||         |...||    |||    |
  Fly    78 AEDSSKVMGNTQKVLVVAMFVWNQLNILLNFRRLARIYDDIADLEIDLNNASSGFVGQRH----W 138

  Fly   106 W-LHFKLGGQKTGLVSLRSEFQQFCRYLIFLYAMMAAEVAIHLG---LWQFQALTQHMLLF---- 162
            | ..|:| ....||            :::.|..:......:.||   .|..:.||:.:|:.    
  Fly   139 WRFRFRL-ALSVGL------------WIVLLVGLTPRFTLVALGPYLHWTNKVLTEIILIMLQLK 190

  Fly   163 WSTYEPLVWLTYLRNLQFVLHLELLREQLTGLEREMGLLAEYSRFASETGRSFPGFESFLRRRLV 227
            .:.|...|.|.|    :.:|....:.:|:: :|.|          .:::..|.......|:|..:
  Fly   191 CTEYCVFVLLIY----ELILRGRHILQQIS-VELE----------GNQSRDSVQELCVALKRNQL 240

  Fly   228 QKQRIYSHVYDMLKCFQGA----FNFSILAVLLTINIRIAVDCYFMYYSIYNNVINND--YYLIV 286
            ...||:..|.::...|..:    |.::.|.:|..:|           :::..:|..|:  .|..|
  Fly   241 LAGRIWGLVNEVSLYFTLSLTLLFLYNELTILQIVN-----------WALIKSVNPNECCQYRRV 294

  Fly   287 PA--LLEIPAFIYA--SQSCMVV---VPRIAHQLHNIVTDSGCCSCPD----LSLQIQNFSLQLL 340
            ..  ||.|..|:..  |:.|:..   :.|:.||::       |.|..:    |.:.::.:|||:.
  Fly   295 GTCLLLSINIFLSCLYSEFCIQTYNSISRVLHQMY-------CLSAAEDYLILKMGLREYSLQME 352

  Fly   341 HQPIRIDCLGLTILDCSLLTRMACSVGTYMIYSIQFIPKF 380
            |..:...|.||..::......|..::..|:|..:||..:|
  Fly   353 HLKLIFTCGGLFDINLKFFGGMVVTLFGYIIILVQFKIQF 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr8aNP_511097.3 7tm_7 9..376 CDD:285581 84/424 (20%)
Gr98dNP_733214.1 7tm_7 13..392 CDD:285581 86/428 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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