DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr8a and Gr23a

DIOPT Version :9

Sequence 1:NP_511097.3 Gene:Gr8a / 31865 FlyBaseID:FBgn0030108 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_787965.1 Gene:Gr23a / 33453 FlyBaseID:FBgn0041248 Length:374 Species:Drosophila melanogaster


Alignment Length:397 Identity:71/397 - (17%)
Similarity:133/397 - (33%) Gaps:117/397 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 FLLIS-------LSALVLACLFSGEEFLYRGDMFGCANDALKYVFAELGVLAIYLETLS-----S 97
            |:|::       ||.|||...|.|               .|.:..:......||.:|:.     |
  Fly    20 FILVAFSLRSRRLSRLVLWLQFLG---------------WLTWFISMWTQSVIYAQTIDCTLDCS 69

  Fly    98 QRHLANFW-----------------------------------WLHFKLGGQKTGLVSLRSEFQQ 127
            .||:..|:                                   ||.|.:.......:.:.     
  Fly    70 LRHILTFFQTVSHAFIVVTSFLDGFRIKQDQLDEPIAFEDSDPWLAFTVLAMLVPTLGVE----- 129

  Fly   128 FCRYLIFLYAMMAAEVAIHLGLWQFQALTQHMLLFWSTYEPLVWLTYLRNLQFVLHLELLREQLT 192
                  :|....|.|.|..:.::..:.|...:.|            .::.:.|:|.:..:..::.
  Fly   130 ------YLVCSNAPEYAFRIRIYHLKTLPSFLAL------------QVQIISFILEVMKVNIRVR 176

  Fly   193 GLEREMGLLAEYSRFASETGRSFPGFESFLRRRLVQKQRIYSHVYDMLKCFQGAFNFSILAVLLT 257
            ..:.::.:||..........:..|.|......|:...:|.|:.::.:.....|.|..|:|.::: 
  Fly   177 QTKLQLLILARELSCRWPQRKQKPQFSDQQAHRVKDLKRRYNDLHYLFVRINGYFGGSLLTIII- 240

  Fly   258 INIRIAVDCYFMYYSIYNNVINNDYYLIVP---------ALLEIPAFIYASQSCMVVVPRIAHQL 313
                       ::::|:   ::|.|:|.|.         |:|....||:.....|........|.
  Fly   241 -----------VHFAIF---VSNSYWLFVDIRTRPWRIYAILLNLGFIFNVALQMAAACWHCQQS 291

  Fly   314 HNIVTDSGCCSCPDLSLQ--------IQNFSLQLLHQPIRIDCLGLTILDCSLLTRMACSVGTYM 370
            :|:....||.....:..|        :..||||.|||...:.......|:..||:.|..:|.||:
  Fly   292 YNLGRQIGCLISKLVKPQGSKLYNDLVSEFSLQTLHQRFVVTAKDFFSLNLHLLSSMFAAVVTYL 356

  Fly   371 IYSIQFI 377
            :..|||:
  Fly   357 VILIQFM 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr8aNP_511097.3 7tm_7 9..376 CDD:285581 69/394 (18%)
Gr23aNP_787965.1 7tm_7 <141..362 CDD:285581 45/247 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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