DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr8a and gur-3

DIOPT Version :10

Sequence 1:NP_511097.3 Gene:Gr8a / 31865 FlyBaseID:FBgn0030108 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_509743.2 Gene:gur-3 / 181245 WormBaseID:WBGene00001804 Length:447 Species:Caenorhabditis elegans


Alignment Length:371 Identity:71/371 - (19%)
Similarity:125/371 - (33%) Gaps:136/371 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 LHFKLGGQKTGLVSLR--SEFQQ---------FCRYLIF-LYAMMAAEVAIHLGLWQFQALTQHM 159
            |.||....::...|.|  ::.:|         :|..::. ||:.|..     |||....:..::.
 Worm     9 LEFKWTSPRSSRSSFRTTTDAEQKISIDMSNTYCDQVLGPLYSYMMV-----LGLNHTHSSARNT 68

  Fly   160 LLFWSTYEPLVWLTYL----------RNLQFVLHLELLREQLTGLEREMGL-------------- 200
            :..|    ||....||          |.:.     ::.::..|..|::...              
 Worm    69 MFKW----PLTIYNYLTLAILTAATIRRIS-----QIKQKSATNEEKDAAFHVLNPTFVLTLCHA 124

  Fly   201 LAEYSRFASETGRSFPGFESFLRRRLVQKQRIY----------------SHVYDMLKCFQGAFNF 249
            |..:|..|:       ||  .|.:...|::::|                ||.:.:.|.|. :.:|
 Worm   125 LLMFSGLAA-------GF--LLLKLQKQREKMYHVLDQGLGRNRNEEHDSHHFKLNKLFI-SISF 179

  Fly   250 SILAVLLTINIRIAVDCYFMYYSIYNNVINNDYYLIVPALLEIPAFIYASQSCMVVVPRIAHQLH 314
            |..|.|..  ::||....::......::||...|.::   || ...|:.:.||:.:|..:..||.
 Worm   180 SFAAALSF--VQIATKMRYLDLPDTPDLINRKIYFVI---LE-GYVIFIASSCISLVAILFFQLC 238

  Fly   315 NIV-------------TDSGCCSCPDLSLQ-------------------IQNFSLQLLHQ---PI 344
            .|:             .:...|..|:.|||                   .||||..|.:.   .|
 Worm   239 RILQFSIGQLIEEMVPKEKEECPLPEQSLQQIHDVQIHYQEISNAKLYIEQNFSFSLFYTYGCCI 303

  Fly   345 RIDCL--------GLTI-----------LDCSLLTRMACSVGTYMI 371
            .:.||        |:..           |..::|..|..|:..:||
 Worm   304 PLTCLLGYIAFRNGIQADMAETFSVAIWLTNTMLALMLFSIPAFMI 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr8aNP_511097.3 7tm_7 9..376 CDD:462463 71/371 (19%)
gur-3NP_509743.2 7tm_7 46..425 CDD:462463 64/334 (19%)

Return to query results.
Submit another query.