DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr8a and Gr28b

DIOPT Version :10

Sequence 1:NP_511097.3 Gene:Gr8a / 31865 FlyBaseID:FBgn0030108 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster


Alignment Length:402 Identity:77/402 - (19%)
Similarity:149/402 - (37%) Gaps:101/402 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LMAWSLFLLISLSALVLACLFSGEEFLYRGDMFGCANDALKYVFAELGVLAIYLETL----SSQR 99
            :.|:||.:..:..:  :|..|......|.||:       ::.|...:||..|||...    ..:|
  Fly    91 VFAYSLTIYNNCES--VASYFFRSRITYFGDL-------MQIVSGFIGVTVIYLTAFVPNHRLER 146

  Fly   100 HLANFWWLHFKLGGQKTGLVSLRSEFQQFCRYLIFL--------------YAMMAAEVAIHLGLW 150
            .|..|..:..:|  |..|:..:.|:..:| .|::.:              ..:.::|||..:.| 
  Fly   147 CLQKFHTMDVQL--QTVGVKIMYSKVLRF-SYMVLISMFLVNVLFTGGTFSVLYSSEVAPTMAL- 207

  Fly   151 QFQALTQHMLL-----FWSTYEPLVWLTYLRNLQFVLHLELLREQLTGLEREMGLLAEYS----R 206
            .|..|.||.::     .:|.:      |||..::.|:..::|:          .|..::.    :
  Fly   208 HFTFLIQHTVIAIAIALFSCF------TYLVEMRLVMVNKVLK----------NLAHQWDTRSLK 256

  Fly   207 FASETGRSFPGFESFLRRRLVQK---------QRIYSHVYDMLKCFQGAFNFSILAVLLTINIRI 262
            ..::..||....:||....:|.|         ..|:..:.:........|.:.:|.::....:.|
  Fly   257 AVNQKQRSLQCLDSFSMYTIVTKDPAEIIQESMEIHHLICEAAATANKYFTYQLLTIISIAFLII 321

  Fly   263 AVDCYFMYYSIYNNVINNDYYLIVPALLEIPAFIYASQSCMVVVPRIA----------------- 310
            ..|.|::..::.........:..|    |...|.    ||.:::..||                 
  Fly   322 VFDAYYVLETLLGKSKRESKFKTV----EFVTFF----SCQMILYLIAIISIVEGSNRAIKKSEK 378

  Fly   311 -----HQLHNIVTDSGCCSCPDLSLQIQNFSLQLLHQPIRIDCLGLTILDCSLLTRMACSVGTYM 370
                 |.|.|....:      ::..::|.||:||:|..|.....||..:|.:|...::.::.||:
  Fly   379 TGGIVHSLLNKTKSA------EVKEKLQQFSMQLMHLKINFTAAGLFNIDRTLYFTISGALTTYL 437

  Fly   371 IYSIQFIPKFSN 382
            |..:||.....|
  Fly   438 IILLQFTSNSPN 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr8aNP_511097.3 7tm_7 9..376 CDD:462463 74/394 (19%)
Gr28bNP_995642.1 7tm_7 45..443 CDD:462463 74/394 (19%)

Return to query results.
Submit another query.