DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr8a and Gr98c

DIOPT Version :9

Sequence 1:NP_511097.3 Gene:Gr8a / 31865 FlyBaseID:FBgn0030108 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_524531.2 Gene:Gr98c / 117336 FlyBaseID:FBgn0046886 Length:408 Species:Drosophila melanogaster


Alignment Length:450 Identity:90/450 - (20%)
Similarity:148/450 - (32%) Gaps:136/450 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGHLGRVLQFHLRLYQVLGFHGLPLPGD--GNPARTRRR---LMAWSLFL-------------- 46
            |.....|:|.......|||...||..|.:  ....|.|||   :..:||:|              
  Fly     3 MEAKRSRLLTTARPYLQVLSLFGLTPPAEFFTRTLRKRRRFCWMAGYSLYLIAILLMVFYEFHAN 67

  Fly    47 LISLSALVLACLFSGEEF---LYRGDMF------GC--ANDALKY-----VFAELGVLAIYLETL 95
            ::||...:..  |..|:|   :.|...|      .|  .|..|.|     ::.|:..|.:.::..
  Fly    68 IVSLHLEIYK--FHVEDFSKVMGRTQKFLIVAIATCNQLNILLNYGRLGLIYDEIANLDLGIDKS 130

  Fly    96 SSQRHLANFWWLHFKLGGQKTGLVSLRSEFQQFCRYLIFLYAMMAAEVAIHLGL--------WQF 152
            |......:.||                 .|:......|.|:.::...|...|.|        |..
  Fly   131 SKNFCGKSHWW-----------------SFRLRLTLSIGLWMVIIIGVIPRLTLGRAGPFFHWVN 178

  Fly   153 QALTQHMLLFWSTYEPLVWLTYLRNLQFVLH----LELLREQL-------------TGLEREMGL 200
            |.|||.:|:......|...|..|...:.:|.    ||.|::.|             ..|::...|
  Fly   179 QVLTQIILIMLQLKGPEYCLFVLLVYELILRTRHVLEQLKDDLEDFDCGARIQELCVTLKQNQLL 243

  Fly   201 LAEYSRFASETGRSFPGFESFLRRRLVQKQRIYSHVYDMLKCFQGAFNFSILAVLLTINIRIAVD 265
            :....|...|.|..|....:.|                        |.::.|.:|..:|      
  Fly   244 IGRIWRLVDEIGAYFRWSMTLL------------------------FLYNGLTILHVVN------ 278

  Fly   266 CYFMYYSIYNNVINND----------YYLIVPALLEIPAFIYASQSCMVVVPRIAHQLHNIVTDS 320
                 ::|..::..||          .:|....||.    .:.|:.|:.....|::.||.|    
  Fly   279 -----WAIIRSIDPNDCCQLNRLGSITFLSFNLLLT----CFFSECCVKTYNSISYILHQI---- 330

  Fly   321 GCCSCPD----LSLQIQNFSLQLLHQPIRIDCLGLTILDCSLLTRMACSVGTYMIYSIQF 376
            ||....:    |.:.::.:.||:.|..:...|.||..::..|...|..::..|:|..:||
  Fly   331 GCLPTAEEFQMLKMGLKEYILQMQHLKLLFTCGGLFDINIKLFGGMLVTLCGYVIIIVQF 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr8aNP_511097.3 7tm_7 9..376 CDD:285581 86/440 (20%)
Gr98cNP_524531.2 7tm_7 15..393 CDD:285581 86/437 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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