DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31251 and nudcd2

DIOPT Version :9

Sequence 1:NP_732260.2 Gene:CG31251 / 318645 FlyBaseID:FBgn0051251 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_001016379.1 Gene:nudcd2 / 549133 XenbaseID:XB-GENE-1003676 Length:157 Species:Xenopus tropicalis


Alignment Length:117 Identity:34/117 - (29%)
Similarity:53/117 - (45%) Gaps:15/117 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 CWSQTLKDVEVQALLPKDHQTAKKLHISIQAQHIKVSSKHSPETIILEGNLSQRIKHKEAVWTID 203
            ||.||:::|.::..:| |...||::...:.::.|.:..|...   ||:|.|.......||.||::
 Frog    20 CWYQTMEEVFIEVKVP-DGTLAKEVQCKLGSRDISLVVKGKD---ILKGKLFDSTISDEATWTLE 80

  Fly   204 QNRLI-ISYDKAKE---LWWDRLFEGDPEID-------SKKIECERYIDDLP 244
            ..:|| |...|...   ..|..|.|||...|       .||:..||:..:.|
 Frog    81 DRKLIRIILTKTNRDAGNCWTSLLEGDYSADPWIQDEMQKKLTLERFQRENP 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31251NP_732260.2 Nudc_N 5..64 CDD:290757
p23_NUDC_like 139..223 CDD:107224 24/87 (28%)
nudcd2NP_001016379.1 p23_NUDCD2_like 12..104 CDD:107243 24/87 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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