DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31251 and nudc

DIOPT Version :10

Sequence 1:NP_732260.2 Gene:CG31251 / 318645 FlyBaseID:FBgn0051251 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_001240718.1 Gene:nudc / 100380054 XenbaseID:XB-GENE-985468 Length:329 Species:Xenopus tropicalis


Alignment Length:326 Identity:80/326 - (24%)
Similarity:141/326 - (43%) Gaps:67/326 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QRNDAMLMEILQDRK-TITGFLDSIFGFLRRNTDFY------------------HT-------KR 42
            :|.||||:.:.|..: .:...:::.|.||||.|||:                  |.       |:
 Frog     8 ERFDAMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFVGGENAAAEKLITQAFNHHNKLALAAQKQ 72

  Fly    43 DEADKIGFPKGVRDQILYGAMQRYDPDCLLQSLTAEGGADDGETAPPAV------EEVVLESEDG 101
            .:||::. .:.||.:......:....:..:..||.|    :.|.....:      |:...|:|:.
 Frog    73 KDADRLE-REAVRQEREAKKKETEAGESRITELTDE----EAERLQKEIDKNKEKEKATRETEEK 132

  Fly   102 PQ----DEEMKPIESQPPQKGKEQSKFSPSDYKNGDVFETHCWSQTLKDVEVQALLPKDHQTAKK 162
            |:    .||.|..|.:..:|.|  .|..|:. .||.....:.|:|||.:|::....|        
 Frog   133 PEPEKDGEEEKEEEEEDDEKDK--GKLKPNS-GNGANLPHYRWTQTLSEVDLVVPFP-------- 186

  Fly   163 LHISIQAQHIKVSSKHSPETI-------ILEGNLSQRIKHKEAVWTIDQNRLI-ISYDKAKEL-W 218
            :...::.:.::|..|....||       :|:|.|...||.:|..|.|:..::: :..:|...: |
 Frog   187 VSFRLKGKDVQVDIKRHRLTIGLRGQKPVLDGELFNDIKVEECSWLIEDGKVVTVHLEKINTMEW 251

  Fly   219 WDRLFEGDPEIDSKKIECER-YIDDLPEETQATIEKLRVQQLAADKQQNEIQTSSPDQAINLDRL 282
            |.|:...||||::|||..|. .:.||..||::.:||:..     |::|..:...:.|:....|.|
 Frog   252 WSRVVLTDPEINTKKINPENSKLSDLDGETRSMVEKMMY-----DQRQKSMGLPTSDEQKKQDIL 311

  Fly   283 K 283
            |
 Frog   312 K 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31251NP_732260.2 Nudc_N 5..64 CDD:464073 20/84 (24%)
p23_NUDC_like 139..223 CDD:107224 22/92 (24%)
nudcNP_001240718.1 Nudc_N 9..60 CDD:464073 14/50 (28%)
NuDC 95..>124 CDD:465078 4/32 (13%)
p23_mNUDC_like 170..256 CDD:107241 22/93 (24%)

Return to query results.
Submit another query.