DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir94f and glr-8

DIOPT Version :10

Sequence 1:NP_732868.2 Gene:Ir94f / 318632 FlyBaseID:FBgn0051225 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001368711.1 Gene:glr-8 / 180924 WormBaseID:WBGene00001619 Length:547 Species:Caenorhabditis elegans


Alignment Length:526 Identity:108/526 - (20%)
Similarity:182/526 - (34%) Gaps:160/526 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 DEDSMQELNSARLLLKHSQDLKMPNVVLLSSTFFTSATLYSYEMFPEFNVQKLVYQAYLTLFPYK 179
            |.:|::.||:  :|...::.:..|....|:|.:..:.||.:.:.|                   .
 Worm    12 DPNSIRTLNN--ILESINEKVAHPPQTSLTSDYGDAYTLSNEKHF-------------------S 55

  Fly   180 LGNLKGHPIRTVPDNSEPLTIVRKTLNGSIAID-----GLVWQFMIEFAKHINATLQLPIEPHPE 239
            |..:||..::.|....||..:.....:.:...|     |:|.:.:.|..|.:|.|.::    .|.
 Worm    56 LSEMKGRTLKMVVPAIEPPYVNYVNFSDAAVTDKGYGPGVVMEILKEIGKRLNLTYEI----LPA 116

  Fly   240 KSIKLVQILD---------LVRNQTVDIAA--SLRPYSLNVQRSSTHIYGSPMMVGNWCMMLPTE 293
            ......:.|:         |||.: ||:.|  ::..|..:|....|:.:          ...||.
 Worm   117 LGSTWGEYLNGSWTGAFGQLVRGE-VDLLAGGAIMEYDRSVIADLTYPF----------QFEPTG 170

  Fly   294 RVIGSHEA----LTRLMKSPWTW--------LILL----------------------------LF 318
            .:|.|.|.    ...::..|::|        :||:                            :|
 Worm   171 IMIRSPEKYEDDTLLIVTEPFSWEVWVITAAVILISGVIFLVMTNIIRKVYEEMTVTPFESIWVF 235

  Fly   319 YS--VHRFLAQKTRLRSSLIHLIKL--LINLSLICFLQAQLSAYFIGPQKVNHISNMQQ----VE 375
            :|  |.:.|.::.|..|..: |:.|  |.:::|.......|.|.|...:......|:.|    |:
 Worm   236 FSIFVQQGLPEQPRSWSCRV-LVALWWLASITLSATFTGSLVALFAVDKTNVPFQNIDQLVRLVK 299

  Fly   376 ESGLKIRGMRGEFMEYPIDMRSRYASSFLLHDLFFDL-----AQYRNSL-------NTSYGYTVT 428
            :...:|......|....:..||:..   :..||:.::     .:|.|.:       ..:.||.: 
 Worm   300 QGKFEIVMDENSFTRTEMIARSKLP---VYRDLWHEMIVNHKVKYVNGIARGVAFVRANPGYAL- 360

  Fly   429 SVKWELYKEAQRHFRRPLFRYSEEICVQKLSLF---------SLIQQSNCIYCYRSRIFILRMHE 484
                 |...|..:|    :.||:  |  |:.||         |:....|.||.......|..|.|
 Worm   361 -----LGPMATLNF----YAYSD--C--KVILFNDGILPVYLSIPLVKNSIYSPYFSTKIREMVE 412

  Fly   485 AGLIRLWYR--RSYYVM--------VTAGRFPIGDLSTVHRAQPIRWTEWQNVVLLHGVGLLFSV 539
            .|..:.|..  |||..|        .|.|.....||.   |||...|      |.|.|.||  .:
 Worm   413 RGFTQKWIADYRSYVAMQKINECNSTTIGPKSYLDLK---RAQGAFW------VFLGGAGL--GL 466

  Fly   540 VVFVIE 545
            .:||.|
 Worm   467 ALFVGE 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir94fNP_732868.2 None
glr-8NP_001368711.1 PBP2_iGluR_ligand_binding 62..424 CDD:270219 74/394 (19%)

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