DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha-Man-Ic and MNS1

DIOPT Version :9

Sequence 1:NP_733331.1 Gene:alpha-Man-Ic / 318624 FlyBaseID:FBgn0051202 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_012665.3 Gene:MNS1 / 853595 SGDID:S000003892 Length:549 Species:Saccharomyces cerevisiae


Alignment Length:557 Identity:148/557 - (26%)
Similarity:255/557 - (45%) Gaps:105/557 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 TVGVIVITYIQCRAMM-----RESFQKNIPSNDNSLKDMNPDDMRAKIKEMMMHAWRNYARVVWG 92
            :||:.:.|.:...|.:     .|.|::..|         ...:||.:|:.|.:.:||:|::..||
Yeast     4 SVGISIATIVAIIAAIYYVPWYEHFERKSP---------GAGEMRDRIESMFLESWRDYSKHGWG 59

  Fly    93 TNEFRPISRRVHFGGDFATYKLGATIIESLDTLHLM---------GLNKELRRSRDWIEKSFHLD 148
            .:.:.||....| ........||..|::|:|||.||         ....|::||..||......|
Yeast    60 YDVYGPIEHTSH-NMPRGNQPLGWIIVDSVDTLMLMYNSSTLYKSEFEAEIQRSEHWINDVLDFD 123

  Fly   149 RVDEALSVYELTSRLLCPMLTLYSLT------GDSLYMDKAIHIADKILPAF-DTPTGIPRRLVV 206
             :|..::|:|.|.|:|..:|:.|.|:      ..::|::|||.:.|::..|| .|.||||...:.
Yeast   124 -IDAEVNVFETTIRMLGGLLSAYHLSDVLEVGNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSIN 187

  Fly   207 PKEGSTLTKYL-SDISRTSEFGSLHLEFYYLSEVSGYPVYRERVDAIREILAKT----TRPNGLY 266
            ...|..:..:. ...|.|:||.:|.:||.||:.::|...|.|.|:.:.|.|.|.    ...:||.
Yeast   188 LHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLV 252

  Fly   267 P----------NAYCTKFG-KWENYNCSMHRLYDTLLKSWIQSGRTDTQNADTFKEAMLAVAQNL 320
            |          .|...:|| :.:::       |:.|||.::.:  .:|...|.::::|..:.::|
Yeast   253 PIYTFPDTGKFGASTIRFGSRGDSF-------YEYLLKQYLLT--HETLYYDLYRKSMEGMKKHL 308

  Fly   321 VV-INPEDVTYVSTFR---NGTLFHRMRHSDCFAGGLFVLGAAETQMKH---------------- 365
            :. ..|..:.|:....   :|.|..:|.|..||.|||...|:.|....|                
Yeast   309 LAQSKPSSLWYIGEREQGLHGQLSPKMDHLVCFMGGLLASGSTEGLSIHEARRRPFFSLSLERKS 373

  Fly   366 -WEKYAHIGIGLTDTCHDSYWSSPTRLGPDTFAFTEESQQE------------IEPLQRNYYNL- 416
             |:    :..|:||||:..|..|.:.|.|:...|.:.:.::            ::||.|  :|| 
Yeast   374 DWD----LAKGITDTCYQMYKQSSSGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDR--HNLQ 432

  Fly   417 RPEVAETYLVLWRITHHPQYRLWGLEMVQAIEKY----CRMP--YGYTGVMDVNNVTSEPDDVQG 475
            |||..|:.:.::.::|..:||.||.|:..:..:.    |..|  ..:|.:.|...:.::..:...
Yeast   433 RPETVESIMFMYHLSHDHKYREWGAEIATSFFENTCVDCNDPKLRRFTSLSDCITLPTKKSNNME 497

  Fly   476 SFFLGSTLKYLYLLFSDDDVVSLEQWVFNSAGHFLPI 512
            ||:|..||||||:||.|:  ..|.:.|||:..|..|:
Yeast   498 SFWLAETLKYLYILFLDE--FDLTKVVFNTEAHPFPV 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IcNP_733331.1 Glyco_hydro_47 78..512 CDD:279825 137/505 (27%)
MNS1NP_012665.3 Glyco_hydro_47 45..532 CDD:396217 137/505 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54359
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100239
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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