DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ic and EDEM3

DIOPT Version :9

Sequence 1:NP_733331.1 Gene:alpha-Man-Ic / 318624 FlyBaseID:FBgn0051202 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001306889.1 Gene:EDEM3 / 80267 HGNCID:16787 Length:948 Species:Homo sapiens


Alignment Length:604 Identity:146/604 - (24%)
Similarity:238/604 - (39%) Gaps:177/604 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VIRRAQYNWYTANTKSRIRIIATGIFTVGVIVITYIQCRAMMRESFQKNIPSNDNSLKDMNPDDM 71
            |.:||::. ..|.|.:...:.||.::|.|        ...|.||..||                :
Human    13 VPQRARWR-LVAATAAFCLVSATSVWTAG--------AEPMSREEKQK----------------L 52

  Fly    72 RAKIKEMMMHAWRNYARVVWGTNEFRPISRRVHFGG--------DFATYKLGATIIESLDTLHLM 128
            ..::.||..||:.||....:..:|..|::.|....|        |.|..|...|:|:|||||.::
Human    53 GNQVLEMFDHAYGNYMEHAYPADELMPLTCRGRVRGQEPSRGDVDDALGKFSLTLIDSLDTLVVL 117

  Fly   129 GLNKELRRSRDWIEKSFHLDRVDEALSVYELTSRLLCPMLTLYSLT------GDSL--YMDKAIH 185
            ...||...:...:.:..:||. |..:||:|...|:|..:|..:||.      |:.:  |.|:.:.
Human   118 NKTKEFEDAVRKVLRDVNLDN-DVVVSVFETNIRVLGGLLGGHSLAIMLKEKGEYMQWYNDELLQ 181

  Fly   186 IAD----KILPAFDTPTGIPRRLVVPK------EGSTLTKYLSDISRTSEFGSLHLEFYYLSEVS 240
            :|.    |:||||:|.:|:|...:..|      |..|.|:  :| :.|:..|:|.|||..||..:
Human   182 MAKQLGYKLLPAFNTTSGLPYPRINLKFGIRKPEARTGTE--TD-TCTACAGTLILEFAALSRFT 243

  Fly   241 GYPVY----RERVDAIREILAKTTRPNGLYPNAYCTKFGKW----ENYNCSMHRLYDTLLKSWIQ 297
            |..::    |:.:|.:.|...:::...|:..|.:.   |.|    ......:...|:.|||:::.
Human   244 GATIFEEYARKALDFLWEKRQRSSNLVGVTINIHT---GDWVRKDSGVGAGIDSYYEYLLKAYVL 305

  Fly   298 SG------RTDTQ------------------------NADTFKEAMLAVAQNLVVINPEDVTYVS 332
            .|      |.:|.                        ||.|:.:|:||....|.|:..:....:.
Human   306 LGDDSFLERFNTHYDAIMRYISQPPLLLDVHIHKPMLNARTWMDALLAFFPGLQVLKGDIRPAIE 370

  Fly   333 TFRNGTLFHRM------RHSDCFAGGLFVLGAAETQMK-HWEKYAHIGIGLTDTCHDSYWSSPTR 390
            |       |.|      :|:       |:..|..|..: ||.::.                    
Human   371 T-------HEMLYQVIKKHN-------FLPEAFTTDFRVHWAQHP-------------------- 401

  Fly   391 LGPDTFAFTEESQQEIEPLQRNYYNLRPEVAETYLVLWRITHHPQYRLWGLEMVQAIEKYCRMPY 455
                                     ||||.||:...|::.|..|.|...|..:::.:.||.|:|.
Human   402 -------------------------LRPEFAESTYFLYKATGDPYYLEVGKTLIENLNKYARVPC 441

  Fly   456 GYTGVMDVNNVTSEPDDVQGSFFLGSTLKYLYLLFSD--DDVVSLEQWVFNSAGHFLPI------ 512
            |:..:.||.  |...:|...||||....|||||||:|  |.:..:|.::|.:..|.||:      
Human   442 GFAAMKDVR--TGSHEDRMDSFFLAEMFKYLYLLFADKEDIIFDIEDYIFTTEAHLLPLWLSTTN 504

  Fly   513 -----KGVNPMYRQHNSSN 526
                 |.....|.:.:.||
Human   505 QSISKKNTTSEYTELDDSN 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IcNP_733331.1 Glyco_hydro_47 78..512 CDD:279825 126/506 (25%)
EDEM3NP_001306889.1 Glyco_hydro_47 59..498 CDD:279825 126/506 (25%)
PA_EDEM3_like 664..789 CDD:239041
Prevents secretion from ER. /evidence=ECO:0000255|PROSITE-ProRule:PRU10138 945..948
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149708
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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