DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ic and si:ch211-282j22.3

DIOPT Version :10

Sequence 1:NP_733331.1 Gene:alpha-Man-Ic / 318624 FlyBaseID:FBgn0051202 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_003200881.1 Gene:si:ch211-282j22.3 / 562939 ZFINID:ZDB-GENE-091113-49 Length:837 Species:Danio rerio


Alignment Length:555 Identity:142/555 - (25%)
Similarity:229/555 - (41%) Gaps:120/555 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 NWYTANTKSRIRIIATG--IFTVGVIVITYIQCRAMMRESFQKNIPSNDNSLKDMNPD---DMRA 73
            ||.|..|:      |.|  :.|:..:||:   |..       ..:..:|.  :.|.|:   ::|.
Zfish     4 NWITRETR------ACGGLVVTLAALVIS---CPL-------AEVSGHDG--QAMTPEEKSEIRD 50

  Fly    74 KIKEMMMHAWRNYARVVWGTNEFRPISRRVHFGG--------DFATYKLGATIIESLDTLHLMGL 130
            :|.||..||:.:|....:..:|..|:|.|....|        |.:..|...|:|::||||.|:..
Zfish    51 QILEMFDHAYNSYMDYAYPADELMPLSCRGRVRGLEPNRGDVDDSLGKFSLTLIDTLDTLVLLNK 115

  Fly   131 NKELRRSRDWIEKSFHLDRVDEALSVYELTSRLLCPMLTLYSLT------GDSL--YMDKAIHIA 187
            ..|...:...|.:...||. |..:||:|...|:|..:|..:.:.      |..:  |.|:.:|:|
Zfish   116 LDEFEEAVKKIMRDVRLDN-DIVVSVFETNIRVLGGLLGAHVMADVLKQRGQRMQWYRDELLHMA 179

  Fly   188 D----KILPAFDTPTGIPRRLVVPKEGSTLTKYLSDISRTSE--------FGSLHLEFYYLSEVS 240
            .    ::||||:|.:|:|...|..:.|     .::.:|||..        .|:|.|||..||.:|
Zfish   180 KELGYRLLPAFNTTSGLPYPRVNLRYG-----VVNPLSRTGTESDTCTACAGTLILEFAALSRMS 239

  Fly   241 GYPVYRERVDAIREIL-AKTTRPNGLYPNAYCTKFGKW----ENYNCSMHRLYDTLLKSWIQSG- 299
            |..::.|......::| .|..|.:.|.........|.|    ......:...|:.|:|::|..| 
Zfish   240 GDTIFEEHARKAMDVLWEKRQRGSDLVGTVINIHNGDWVRRDSGVGAGIDSYYEYLMKAYILLGD 304

  Fly   300 -----RTDTQNADTFKEAMLAVAQ-----NLVVINPEDVTYVSTFRNGTLFHRMRHSDCFAGGLF 354
                 |.:|.    :...|..::|     |:.:.||  ...|.::.:..|        .|..||.
Zfish   305 KVYLERFNTH----YSAIMKYISQPPLLLNVHMHNP--TVNVRSWMDSLL--------AFFPGLQ 355

  Fly   355 VL-----GAAETQMKHWEKYAHIGIGLTDTCHDSYWSSPTRLGPDTFAFTEESQQEIEPLQRNYY 414
            ||     .|.||                   |:..:....:......|||.|.:     :....:
Zfish   356 VLRGDLKPAIET-------------------HEMLYQVTKQHNFLPEAFTTEFR-----VHWGQH 396

  Fly   415 NLRPEVAETYLVLWRITHHPQYRLWGLEMVQAIEKYCRMPYGYTGVMDVNNVTSEPDDVQGSFFL 479
            .||||.||:...|::.|..|.|...|..:|:.:..:.|:|.|:..|.||...|.|  |...||||
Zfish   397 PLRPEFAESTYFLYKATGDPYYLKVGQSIVEKLNAHARVPCGFAAVQDVRTGTHE--DRMDSFFL 459

  Fly   480 GSTLKYLYLLFSDDD--VVSLEQWVFNSAGHFLPI 512
            ....||||||||:..  .:.::.::|.:..|.||:
Zfish   460 AEMFKYLYLLFSEKSQLPIDIDDYIFTTEAHLLPV 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IcNP_733331.1 Glyco_hydro_47 78..512 CDD:460241 125/484 (26%)
si:ch211-282j22.3XP_003200881.1 Glyco_hydro_47 55..494 CDD:460241 125/484 (26%)
PA_EDEM3_like 642..768 CDD:239041
Blue background indicates that the domain is not in the aligned region.

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