DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ic and edem3

DIOPT Version :10

Sequence 1:NP_733331.1 Gene:alpha-Man-Ic / 318624 FlyBaseID:FBgn0051202 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_005166989.2 Gene:edem3 / 559811 ZFINID:ZDB-GENE-070801-5 Length:888 Species:Danio rerio


Alignment Length:520 Identity:124/520 - (23%)
Similarity:212/520 - (40%) Gaps:139/520 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 MNPDD---MRAKIKEMMMHAWRNYARVVWGTNEFRPISRRVHFGG--------DFATYKLGATII 119
            |:.|:   :|.::.||..||:|||....:..:|..|::.|....|        |.|..|...|:|
Zfish    29 MSRDEKSKLRIQVLEMFDHAYRNYMDHAYPADELMPLTCRGRVRGLEPSRGDVDDALGKFSLTLI 93

  Fly   120 ESLDTLHLMGLNKELRRSRDWIEKSFHLDRVDEALSVYELTSRLLCPMLTLYSL------TGDSL 178
            ::||||.|:....|...:...:.|...||. |..:||:|...|:|..:|..:|:      .|..:
Zfish    94 DTLDTLALLNKTVEFEEAVRRVVKDVRLDN-DIVVSVFETNIRVLGGLLGGHSMAVMLKENGQMV 157

  Fly   179 -YMDKAIHIAD----KILPAFDTPTGIPRRLVVPKEG----STLTKYLSDISRTSEFGSLHLEFY 234
             |.::.:|:|.    ::||||:|.:|:|...|..:.|    .|.|...:: :.|:..|::.|||.
Zfish   158 WYQNELLHMAKDLGLRLLPAFNTSSGLPYPRVNLRHGVHGPETRTGTETE-TCTACAGTIILEFA 221

  Fly   235 YLSEVSGYPVY----RERVDAIREILAKTTRPNGLYPNAYCTKFGKW----ENYNCSMHRLYDTL 291
            .||..:|.|.:    |..:|.:.|   |..|.:.|.........|:|    ......:...|:.|
Zfish   222 ALSRFTGDPTFEAHARRALDFLWE---KRQRNSNLVGTTINIHSGEWVRRDSGVGAGIDSYYEYL 283

  Fly   292 LKSWIQSG------RTDTQNAD------------------------TFKEAMLAVAQNLVVINPE 326
            :|::|..|      |.:|..|.                        |:.:::||....|.|:..:
Zfish   284 MKAYILLGDDQLLLRFNTHYASIMKYISQPPLLLDVHIHKPLLPARTWMDSLLAFFPGLQVLKGD 348

  Fly   327 DVTYVSTFRNGTLFHRM------RHSDCFAGGLFVLGAAETQMK-HWEKYAHIGIGLTDTCHDSY 384
            ....:.|       |.|      :|:       |:..|..|..: ||.::.              
Zfish   349 IRPAIET-------HEMLYQVTKKHN-------FLPEAFTTDFRVHWAQHP-------------- 385

  Fly   385 WSSPTRLGPDTFAFTEESQQEIEPLQRNYYNLRPEVAETYLVLWRITHHPQYRLWGLEMVQAIEK 449
                                           ||||.||:...|::.|..|.|...|..:::.:.:
Zfish   386 -------------------------------LRPEFAESTYFLYKATRDPYYLEVGRTVLENLNR 419

  Fly   450 YCRMPYGYTGVMDVNNVTSEPDDVQGSFFLGSTLKYLYLLFSDDDVV--SLEQWVFNSAGHFLPI 512
            :.|:|.|:..:.||.  |...:|...||||....|||:|||::::.:  ::|.:||.:..|.||:
Zfish   420 FARVPCGFAAMKDVR--TGSHEDRMDSFFLAEMFKYLFLLFAEEEDLPFNVEDYVFTTEAHLLPL 482

  Fly   513  512
            Zfish   483  482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IcNP_733331.1 Glyco_hydro_47 78..512 CDD:460241 119/503 (24%)
edem3XP_005166989.2 Glyco_hydro_47 44..482 CDD:460241 119/503 (24%)
PA_EDEM3_like 644..770 CDD:239041
Blue background indicates that the domain is not in the aligned region.

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