DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ic and Edem1

DIOPT Version :9

Sequence 1:NP_733331.1 Gene:alpha-Man-Ic / 318624 FlyBaseID:FBgn0051202 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001259152.1 Gene:Edem1 / 31154 FlyBaseID:FBgn0023511 Length:1004 Species:Drosophila melanogaster


Alignment Length:509 Identity:134/509 - (26%)
Similarity:226/509 - (44%) Gaps:105/509 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 DMRAKIKEMMMHAWRNYARVVWGTNEFRPISRRVHFGGDFATYKLGATIIESLDTLHLMGLNKEL 134
            ::|..::.|..||:..|.|.....:|.||::...|  ..:.:|.|  |:|::||||..||...|.
  Fly    40 ELREDVRRMFQHAYDGYLRHASNYDELRPLTCDGH--DTWGSYSL--TLIDALDTLATMGNFTEF 100

  Fly   135 RRSRDWIEKSFHLDRVDEALSVYELTSRLLCPMLTLYSLT--------------GDSLYMDKAIH 185
            ||:...:|:....|| |..:||:|...|::..:|:.:.|:              |..|.:  |..
  Fly   101 RRAARLLEEKMDFDR-DINVSVFETNIRIVGGLLSAHLLSKRAGVELEPGWPCKGPLLRL--AED 162

  Fly   186 IADKILPAFDTPTGIP-----RRLVVPKEGSTLTKYLSDISRTSEFGSLHLEFYYLSEVSGYPVY 245
            :|.::||||.|.||:|     .|..||| |.|      .|:.|:..|:..:||..||.::|..:|
  Fly   163 VARRLLPAFVTNTGMPYGTVNLRYGVPK-GET------SITCTAGVGTFLIEFGTLSRLTGKTIY 220

  Fly   246 RE-RVDAIREILAKTTRPNGLYPNAYCTKFGKW----ENYNCSMHRLYDTLLKSWIQSGRTDTQN 305
            .: .:.|:..:.|..: |.||:.|....:.|:|    ......:..|::.|:|:.:...|.:.  
  Fly   221 EDVAMKAVHALWAYRS-PIGLFGNHIDVQSGRWTALDSGIGAGVDSLFEYLVKASVLLNRPEL-- 282

  Fly   306 ADTFKEAMLAVAQNL--------VVINPEDVTYVSTFRNGTLFHRMRHSDCFAGGLFVLGAAETQ 362
            .:.|.||..|:.:.:        |.:|...|| :..|::...|        :.|.|.::|..|..
  Fly   283 LELFHEARAAIDKYMRKEDWYVWVGMNKGRVT-LPVFQSLEAF--------WPGILSIIGDTEPA 338

  Fly   363 MKHWEKYAHIGIGLTDTCHDSYWSSPTRLGPDTFAFTEE----SQQEIEPLQRNYYNLRPEVAET 423
            ::...:|  ||:          |..        :.|..|    :..|..| .|..|.||||:.|:
  Fly   339 LRTISRY--IGV----------WKK--------YGFLPEFYNIAAGEASP-NREVYPLRPELIES 382

  Fly   424 YLVLWRITHHPQYRLWGLEMVQAIEKYCRMPYGYTGVMDVNNVTSEPDDVQGSFFLGSTLKYLYL 488
            .:.|:|.|.:.....:|..|::.:|...:...||..:.:|  ||.|.::...||||..|.|||||
  Fly   383 AMYLYRATGNEYLLEFGEHMLETLEFSAKTKCGYATIRNV--VTHEKENRMESFFLAETSKYLYL 445

  Fly   489 LF-----------------SDDD--VVSLEQWVFNSAGHFLPIKGVNPMYRQHN 523
            ||                 ::||  ||....::||:..|.:.:..::..: .||
  Fly   446 LFDEENFLHNDGSGGELLSTEDDVCVVQAGAYIFNTEAHPMDMSALHCCH-AHN 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IcNP_733331.1 Glyco_hydro_47 78..512 CDD:279825 131/488 (27%)
Edem1NP_001259152.1 Glyco_hydro_47 48..486 CDD:279825 131/486 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453090
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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