DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ic and Edem2

DIOPT Version :10

Sequence 1:NP_733331.1 Gene:alpha-Man-Ic / 318624 FlyBaseID:FBgn0051202 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001004230.1 Gene:Edem2 / 296304 RGDID:1303074 Length:576 Species:Rattus norvegicus


Alignment Length:513 Identity:126/513 - (24%)
Similarity:216/513 - (42%) Gaps:112/513 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 PSNDNSLKDMNPDDMRAKIKEMMMHAWRNYARVVWGTNEFRPISRRVH-FGGDFATYKLGATIIE 120
            |..:.:..|  |...|.::|.|..||:.:|....:..:|.||::...| ..|.|:     .|:|:
  Rat    23 PGPEGTAPD--PAHYRERVKAMFYHAYDSYLENAFPYDELRPLTCDGHDTWGSFS-----LTLID 80

  Fly   121 SLDTLHLMGLNKELRRSRDWIEKSFHLDRVDEALSVYELTSRLLCPMLTLYSL------------ 173
            :||||.::|...|.:|..:.::.:...| :|...||:|...|::..:|:.:.|            
  Rat    81 ALDTLLILGNTSEFQRVVEVLQDNVDFD-IDVNASVFETNIRVVGGLLSAHLLSKKAGVEVEAGW 144

  Fly   174 --TGDSLYMDKAIHIADKILPAFDTPTGIPRRLVVPKEGSTLTKYLSDISRTSEFGSLHLEFYYL 236
              :|..|.|  |...|.|:||||.||||:|...|....|  :....:.::.|:..|:..:||..|
  Rat   145 PCSGPLLRM--AEEAARKLLPAFQTPTGMPYGTVNLLHG--VNPGETPVTCTAGIGTFIVEFATL 205

  Fly   237 SEVSGYPVYRE--RVDAIREILAKTTRPNGLYPNAYCTKFGKWENYNCSMHRLYDTLLKSWIQSG 299
            |.::|.||:.:  ||..:|  |.::....||..|......|||...:..:....|:..:..:   
  Rat   206 SSLTGDPVFEDVARVALMR--LWESRSDIGLVGNHIDVLTGKWVAQDAGIGAGVDSYFEYLV--- 265

  Fly   300 RTDTQNADTFKEAMLAVAQNLVVINPEDVTYVSTFRNGTLFHR----------------MRHSDC 348
                      |.|:|...:.|:.:..|   |....||.|.|..                .:..:.
  Rat   266 ----------KGAILLQDKKLMAMFLE---YNKAIRNYTHFDDWYLWVQMYKGTVSMPVFQSLEA 317

  Fly   349 FAGGLFVL-----GAAETQMKHWEKYAHIGIGLTDTCHDSYWSSPTRLGPDTFAFTEESQQEIEP 408
            :..||..|     .|..|.:.::..:...| ||.:     :::.|.       .:|.|       
  Rat   318 YWPGLQSLIGDIDNAMRTFLNYYTVWKQFG-GLPE-----FYNIPQ-------GYTVE------- 362

  Fly   409 LQRNYYNLRPEVAETYLVLWRITHHPQYRLWGLEMVQAIEKYCRMPYGYTGVMDVNNVTSEPDDV 473
             :|..|.||||:.|:.:.|:|.|..|.....|.:.|::|||..::..|:..:.|:.:  .:.|:.
  Rat   363 -KREGYPLRPELIESAMYLYRATGDPTLLELGRDAVESIEKISKVECGFATIKDLRD--HKLDNR 424

  Fly   474 QGSFFLGSTLKYLYLLFSDDD-------------------VVSLEQWVFNSAGHFLPI 512
            ..||||..|:|||||||..::                   ::....::||:..|  ||
  Rat   425 MESFFLAETVKYLYLLFHPNNFIHNNGSTFDSVMTPHGECILGAGGYIFNTEAH--PI 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IcNP_733331.1 Glyco_hydro_47 78..512 CDD:460241 119/490 (24%)
Edem2NP_001004230.1 Glyco_hydro_47 42..480 CDD:460241 119/490 (24%)

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