DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ic and Man1c1

DIOPT Version :9

Sequence 1:NP_733331.1 Gene:alpha-Man-Ic / 318624 FlyBaseID:FBgn0051202 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_036019960.1 Gene:Man1c1 / 230815 MGIID:2446214 Length:669 Species:Mus musculus


Alignment Length:490 Identity:199/490 - (40%)
Similarity:284/490 - (57%) Gaps:52/490 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 RAKIKEMMMHAWRNYARVVWGTNEFRPISRR---------------------------------- 102
            |.||||||..:|:||.|...|.||.||:::.                                  
Mouse   170 REKIKEMMRFSWQNYRRYAMGKNELRPLTKDGFEGSMFEKGPHFVTLPYVLARLQFQDGQRNPRE 234

  Fly   103 -----------VHFGGDFATYKLGATIIESLDTLHLMGLNKELRRSRDWIEKSFHLDRVDEALSV 156
                       ||..|  |....|||||:|||||:||.|.:|.:.::.|::.||||:...|| |:
Mouse   235 QKAANWFIKHCVHLAG--AGGLSGATIIDSLDTLYLMELKEEFQEAKAWVQDSFHLNVSGEA-SL 296

  Fly   157 YELTSRLLCPMLTLYSLTGDSLYMDKAIHIADKILPAFDTPTGIPRRLVVPKEGSTLTKYLSDIS 221
            :|:..|.:..:|:.:.|||:.::..|||.:.:|:||||:||||||:.:|..|.||.........|
Mouse   297 FEVNIRYIGGLLSAFYLTGEEVFRVKAIKLGEKLLPAFNTPTGIPKGVVNFKSGSWGWATAGSSS 361

  Fly   222 RTSEFGSLHLEFYYLSEVSGYPVYRERVDAIREILAKTTRPNGLYPNAYCTKFGKWENYNCSMHR 286
            ..:|||||||||.:|:|:||.||:.|:|..||::|.:..:|.|||||......|.|..::.|:..
Mouse   362 ILAEFGSLHLEFLHLTELSGNPVFAEKVKHIRKVLREIDKPFGLYPNFLSPTSGNWVQHHVSVGG 426

  Fly   287 L----YDTLLKSWIQSGRTDTQNADTFKEAMLAVAQNLVVINPEDVTYVSTFRNGTLFHRMRHSD 347
            |    |:.|:|||:.|.:||.:..:.:.||:.|:...||.::|..:||::.:|.|.|.|:|.|..
Mouse   427 LGDSFYEYLIKSWLMSAKTDMEAKNMYYEALEAIETYLVNVSPGGLTYIAEWRGGILDHKMGHLA 491

  Fly   348 CFAGGLFVLGAAETQMKHWEKYAHIGIGLTDTCHDSYWSSPTRLGPDTFAFTEESQQEIEPLQRN 412
            ||:||:..|||.:.:......|..:...:|.|||:||..|.|:|||:.|.|....:.....|..:
Mouse   492 CFSGGMIALGADDAKEDKRAYYRELAAQITRTCHESYARSDTKLGPEAFWFNSGREAVATQLSES 556

  Fly   413 YYNLRPEVAETYLVLWRITHHPQYRLWGLEMVQAIEKYCRMPYGYTGVMDVNNVTSEPDDVQGSF 477
            ||.|||||.|:|:.|||.||.|.||.||.|:|.|:||:||...|::|:.||.:.....|:.|.||
Mouse   557 YYILRPEVVESYMYLWRQTHDPIYREWGWEVVMALEKHCRTEAGFSGIQDVYSSNPNHDNRQQSF 621

  Fly   478 FLGSTLKYLYLLFSDDDVVSLEQWVFNSAGHFLPI 512
            ||..||||||||||:|:|:|||.||||:..|.||:
Mouse   622 FLAETLKYLYLLFSEDNVLSLEDWVFNTEAHPLPV 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IcNP_733331.1 Glyco_hydro_47 78..512 CDD:279825 193/482 (40%)
Man1c1XP_036019960.1 Glyco_hydro_47 176..656 CDD:396217 193/482 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839758
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54359
OrthoDB 1 1.010 - - D263455at33208
OrthoFinder 1 1.000 - - FOG0001280
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100239
Panther 1 1.100 - - O PTHR11742
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X635
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.720

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