DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha-Man-Ic and mans-3

DIOPT Version :9

Sequence 1:NP_733331.1 Gene:alpha-Man-Ic / 318624 FlyBaseID:FBgn0051202 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_508877.1 Gene:mans-3 / 180787 WormBaseID:WBGene00020197 Length:584 Species:Caenorhabditis elegans


Alignment Length:569 Identity:162/569 - (28%)
Similarity:264/569 - (46%) Gaps:77/569 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IRRAQYNWY-TANTKSRIRIIATGIFTVGVIVITYIQCRAMMRESF---------------QKNI 56
            ||....:|: |.||.::..||.|.:.::.|::....|..|...:..               ||..
 Worm    26 IRARARHWFSTRNTPTKACIIFTILLSIFVLITICSQGEAKREQPIVENPEIIINEQVIAGQKTK 90

  Fly    57 PSNDNSLKDMNP--------------------------------DDMRAKIKEMMMHAWRNYARV 89
            .|.:.|.:::.|                                :|.:..:.:...|||..|.:.
 Worm    91 HSKEESAENLKPVHDIDRQIVEDEMDAPETGGGNEKIVKFTGPTNDRQKAVVKAFQHAWIGYKKY 155

  Fly    90 VWGTNEFRPISRRVHFGGDFATYKLGATIIESLDTLHLMGLNKELRRSRDWIEKSFHLDRVDEAL 154
            .||.:..:|:|:..   .|:  :..|.||::.|||..:|||..|...:.:||:.:...:: |..:
 Worm   156 AWGHDTLKPVSKSY---SDW--FDTGLTIVDGLDTAIIMGLEDEATEATEWIQNTLTFEK-DRMV 214

  Fly   155 SVYELTSRLLCPMLTLYSLTGDSLYMDKAIHIADKILPAFDTPTGIPRRLV-VPKEGSTLTKYLS 218
            :.:|.|.|:|..|::.:.|||..::::|::.:.|::|.||.:|:.||...| :.|..:|..::.:
 Worm   215 NFFECTIRVLGGMMSAFHLTGKKMFLEKSVDLGDRLLSAFKSPSPIPYSDVNLLKRTATNPQWGA 279

  Fly   219 DISRTSEFGSLHLEFYYLSEVSGYPVYRERV----DAIREILAKTTRP-NGLYPNAYCTKFGKWE 278
            | |..||..::.||:..||..||...|.:..    ..|.:|..:|... .|::.||....|.|..
 Worm   280 D-SSLSEVTTVQLEYRALSRASGNSTYEDLTFNVFKHIHKIGCETHEGLCGMFINANTGNFKKDS 343

  Fly   279 --NYNCSMHRLYDTLLKSWIQSGRTDTQNADTFKEAMLAVAQNLV-VINPEDVTYVSTFRNG-TL 339
              .:.......|:.|.|.|||:|:|.....:.:.:||.|:.:.|. ...|..:.::....:| |.
 Worm   344 TITFGARSDSFYEYLFKQWIQTGKTIDWLKEDYGKAMKAMEKYLYRNSKPNKMFFIGELLSGQTY 408

  Fly   340 FHRMRHSDCFAGGLFVLGAAE-TQMKHWEKYAHIGIGLTDTCHDSYWSSPTRLGPDTFAFTEESQ 403
            ..:|.|..||..|....|:.. ...||.:....||    :|||:.| .:||.|||:...|.....
 Worm   409 SPKMDHLVCFIAGTLSQGSQHGFPRKHLDMAEKIG----ETCHNMY-DNPTGLGPEIAHFNMIPG 468

  Fly   404 QE---IEPLQRNYYNLRPEVAETYLVLWRITHHPQYRLWGLEMVQAIEKYCRMPY-GYTGVMDVN 464
            :|   ::||..:.. ||||..|.:..|:|.|...:|:.||....||||||.|:|. ||:.:.:|.
 Worm   469 KEDLYVKPLDAHCL-LRPEAIEAWFYLYRFTGDKKYQEWGWSAFQAIEKYARIPTGGYSSISNVK 532

  Fly   465 NVTSEPDDVQGSFFLGSTLKYLYLLFSDDD-VVSLEQWVFNSAGHFLPI 512
            .:.....|...||.||.|.||||||..||. |:.|::|||.:.||.|||
 Worm   533 QINVRFRDSMESFLLGETFKYLYLLLGDDQTVLPLDKWVFTTEGHPLPI 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IcNP_733331.1 Glyco_hydro_47 78..512 CDD:279825 142/449 (32%)
mans-3NP_508877.1 Glyco_hydro_47 144..581 CDD:279825 142/449 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54359
OrthoDB 1 1.010 - - D263455at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100239
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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