DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ic and mans-4

DIOPT Version :9

Sequence 1:NP_733331.1 Gene:alpha-Man-Ic / 318624 FlyBaseID:FBgn0051202 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001255361.1 Gene:mans-4 / 177726 WormBaseID:WBGene00013881 Length:532 Species:Caenorhabditis elegans


Alignment Length:548 Identity:154/548 - (28%)
Similarity:258/548 - (47%) Gaps:78/548 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RIRIIATGIFTVGVIVITYIQCRAMM-----------------RESFQKNIPSNDNS-------- 62
            ||:|....:|   ::.|.|:|....:                 ::.|..|..:..||        
 Worm     3 RIKINRKTLF---ILFIAYMQLLVFLALYLNLAGPAELLNPRRQKFFGTNSANRQNSNETYGTPK 64

  Fly    63 ---LKDMNP------DDMRAKIKEMMMHAWRNYARVVWGTNEFRPISRRVHFGGDFATYKLGATI 118
               ||...|      ::.:..|.....|||..|.:..||.:|.||:|:|  |...|.   ||.||
 Worm    65 ATKLKRAPPVFQGPTNERQKAIVRAFQHAWSGYKKYAWGHDELRPVSKR--FDDSFG---LGLTI 124

  Fly   119 IESLDTLHLMGLNKELRRSRDWIEKSFHLDRVDEALSVYELTSRLLCPMLTLYSLTGDSLYMDKA 183
            |:||||..:|||.:|.|...:||.::.::... .:::|:|.|.|:|..:|:.|.|||:...::||
 Worm   125 IDSLDTAIIMGLEEETRDGVEWIRENLNVSPA-RSVNVFETTIRVLGGLLSGYHLTGEEALLEKA 188

  Fly   184 IHIADKILPAFDTPTG-IPRRLVVPKEGSTLTKYLSDISRTSEFGSLHLEFYYLSEVSGYPVYRE 247
            ..:.|.::.||...:. ||:..|....|:..:.. .|:|..:|..:|.|||..|:.::|...|.:
 Worm   189 TQLGDNLIKAFTKSSSLIPKSDVNLDNGNACSPN-RDLSSLAEATTLQLEFRDLTALTGDQKYED 252

  Fly   248 ----RVDAIREILAKTTRPNGLYPNAYCTKFGKWENYNCSM----HRLYDTLLKSWIQSGRTDTQ 304
                ..:.:..:..|  :.:||.| .|....|:::..:.::    ...|:.|:|.|:|:.::...
 Worm   253 VAFGASEHVHNVGCK--KMDGLCP-FYIDGKGEFKKSSITLGARADSYYEYLIKQWLQTKKSIDW 314

  Fly   305 NADTFKEAMLAVAQNLV-VINPEDVTYVSTFRNGTLFH-RMRHSDCFAGGLFV---LGAAETQMK 364
            ..|.|.:::.|:.::|. ...|..:.::........|: :|.|..||..|..|   |...:...:
 Worm   315 LRDDFIQSIAAMKKHLYRQSQPNSIWFLGEITELAQFYPKMDHLVCFLSGSLVLSHLNGLDHDNE 379

  Fly   365 HWEKYAHIGIGLTDTCHDSYWSSPTRLGPDTFAFTEESQQEIEPLQRNYYN------LRPEVAET 423
            |.|...:||    :.||..| .:||.|||:...|..|...::........|      ||||..|.
 Worm   380 HLEMAKNIG----NVCHKMY-ENPTGLGPEIIHFNMEDSSDMTQADTYVKNLDAHSLLRPEAIEA 439

  Fly   424 YLVLWRITHHPQYRLWGLEMVQAIEKYCRMPYGYTGVMDVNNVTSEP---DDVQGSFFLGSTLKY 485
            :..|:|:|...:|:.||.:..::||||.::..|  |...::||..:.   .|...||||..||||
 Worm   440 WFYLYRVTKDKKYQEWGWKAFESIEKYAKVETG--GYSSIDNVLRKKIKRRDKMESFFLAETLKY 502

  Fly   486 LYLLFSDD-DVVSLEQWVFNSAGHFLPI 512
            ||||.:|| :::.|::||.|:..|.|||
 Worm   503 LYLLMADDQEILPLDRWVLNTEAHPLPI 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IcNP_733331.1 Glyco_hydro_47 78..512 CDD:279825 137/457 (30%)
mans-4NP_001255361.1 Glyco_hydro_47 89..530 CDD:279825 137/457 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54359
OrthoDB 1 1.010 - - D263455at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100239
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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