DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ic and mans-1

DIOPT Version :9

Sequence 1:NP_733331.1 Gene:alpha-Man-Ic / 318624 FlyBaseID:FBgn0051202 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_492116.1 Gene:mans-1 / 172510 WormBaseID:WBGene00008411 Length:540 Species:Caenorhabditis elegans


Alignment Length:474 Identity:176/474 - (37%)
Similarity:272/474 - (57%) Gaps:14/474 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 MMRESFQKN---IPSNDNSLKDMNPDDMRAKIKEMMMHAWRNYARVVWGTNEFRPISRRVHFGGD 108
            :.|::.:.|   ||..:....| :.:..|..:|:|:..||..|.:..||.||.||.||..|....
 Worm    63 LRRKAEEANPIPIPKPEIGASD-DAEGRRIFVKQMIKFAWDGYRKYAWGENELRPNSRSGHSSSI 126

  Fly   109 FATYKLGATIIESLDTLHLMGLNKELRRSRDWIEKSFHLDRVDEALSVYELTSRLLCPMLTLYSL 173
            |...|.|||||:::|||:|:||.:|.:.:||||............|||:|...|....:|:.::|
 Worm   127 FGYGKTGATIIDAIDTLYLVGLKEEYKEARDWIADFDFKTSAKGDLSVFETNIRFTGGLLSAFAL 191

  Fly   174 TGDSLYMDKAIHIADKILPAFDTPTGIPRRLVVPKEGSTLT-KYLSDISRTSEFGSLHLEFYYLS 237
            |||.:::.||..:|..:||||:||:|||..|:..:.|.:.| .:.|..:..||:||:.|||.|||
 Worm   192 TGDKMFLKKAEDVATILLPAFETPSGIPNSLIDAQTGRSKTYSWASGKAILSEYGSIQLEFDYLS 256

  Fly   238 EVSGYPVYRERVDAIREILAKTTRPNGLYPNAYCTKFG--KWENYNCSMHRL----YDTLLKSWI 296
            .::|.||:.::.|.||::|....:|.|||| .|.|...  :|..:..||..:    |:.|||.||
 Worm   257 NLTGNPVFAQKADKIRDVLTAMEKPEGLYP-IYITMDNPPRWGQHLFSMGAMADSWYEYLLKQWI 320

  Fly   297 QSGRTDTQNADTFKEAMLAVAQNLVVINPE-DVTYVSTFRNGTLFHRMRHSDCFAGGLFVLGAAE 360
            .:|:.|.:....::||:.|:.:.::..:.: ::.|.:......:.|...|..||:||:.||.|..
 Worm   321 ATGKKDDRTKREYEEAIFAMEKRMLFKSEQSNLWYFAKMNGNRMEHSFEHLACFSGGMVVLHAMN 385

  Fly   361 TQMKH-WEKYAHIGIGLTDTCHDSYWSSPTRLGPDTFAFTEESQQEIEPLQRNYYNLRPEVAETY 424
            .:.|. .:.|..:|..:..|||:||..|.|.:||::|.||...:.:.|..|.:||.|||||.||:
 Worm   386 EKNKTISDHYMTLGKEIGHTCHESYARSTTGIGPESFQFTSSVEAKTERRQDSYYILRPEVVETW 450

  Fly   425 LVLWRITHHPQYRLWGLEMVQAIEKYCRMPYGYTGVMDVNNVTSEPDDVQGSFFLGSTLKYLYLL 489
            ..|||.|...:||.|..:.||.:|:||:...||:|:.:|...:.|.||||.||......|||||:
 Worm   451 FYLWRATKDEKYRQWAWDHVQNLEEYCKGTAGYSGIRNVYESSPEQDDVQQSFLFAELFKYLYLI 515

  Fly   490 FSDDDVVSLEQWVFNSAGH 508
            ||:|:::.|:|||||:..|
 Worm   516 FSEDNILPLDQWVFNTEAH 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IcNP_733331.1 Glyco_hydro_47 78..512 CDD:279825 169/440 (38%)
mans-1NP_492116.1 Glyco_hydro_47 96..538 CDD:279825 169/440 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1331
OMA 1 1.010 - - QHG54359
OrthoDB 1 1.010 - - D263455at33208
OrthoFinder 1 1.000 - - FOG0001280
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100239
Panther 1 1.100 - - O PTHR11742
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X635
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.780

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