DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha-Man-Ic and Man1a

DIOPT Version :9

Sequence 1:NP_733331.1 Gene:alpha-Man-Ic / 318624 FlyBaseID:FBgn0051202 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_006512631.1 Gene:Man1a / 17155 MGIID:104677 Length:746 Species:Mus musculus


Alignment Length:487 Identity:197/487 - (40%)
Similarity:285/487 - (58%) Gaps:34/487 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 RAMMRESFQKNIPSNDNSLKDMNPDDMRAKIKEMMMHAWRNYARVVWGTNEFRPISRRVHFGGDF 109
            |.:.:..|...:...:....|....:.||||||||.|||.||.|..||.||.:|||:..|....|
Mouse   262 RGLPKVDFLPPVGVENREPADATIREKRAKIKEMMTHAWNNYKRYAWGLNELKPISKEGHSSSLF 326

  Fly   110 ATYKLGATIIESLDTLHLMGLNKELRRSRDWIEKSFHLD-RVDEALSVYELTSRLLCPMLTLYSL 173
            ...| ||||:::||||.:||:..|.:.::.||:|  :|| .|:..:||:|:..|.:..:|:.|.|
Mouse   327 GNIK-GATIVDALDTLFIMGMKTEFQEAKSWIKK--YLDFNVNAEVSVFEVNIRFVGGLLSAYYL 388

  Fly   174 TGDSLYMDKAIHIADKILPAFDTPTGIPRRLVVPKEGSTLTKYLSDISRT-----------SEFG 227
            :|:.::..||:.:..|:||||.||:|||..|:..|.|         |.|.           :|||
Mouse   389 SGEEIFRKKAVELGVKLLPAFHTPSGIPWALLNMKSG---------IGRNWPWASGGSSILAEFG 444

  Fly   228 SLHLEFYYLSEVSGYPVYRERVDAIREILAKTTRPNGLYPNAYCTKFGKWENYNCSMHRL----Y 288
            :|||||.:||.:||.||:.|:|..||.:|.|..:|.|||||......|:|..::.|:..|    |
Mouse   445 TLHLEFMHLSHLSGDPVFAEKVMKIRTVLNKLDKPEGLYPNYLNPSSGQWGQHHVSVGGLGDSFY 509

  Fly   289 DTLLKSWIQSGRTDTQNADTFKEAMLAVAQNLVVINPEDVTYVSTFRNGTLFHRMRHSDCFAGGL 353
            :.|||:|:.|.:||.:....:.:|:.|:..:|:..:...:||::.::.|.|.|:|.|..|||||:
Mouse   510 EYLLKAWLMSDKTDLEAKKMYFDAVQAIETHLIRKSSGGLTYIAEWKGGLLEHKMGHLTCFAGGM 574

  Fly   354 FVL---GAAETQMKHWEKYAHIGIGLTDTCHDSYWSSPTRLGPDTFAFTEESQQEIEPLQRNYYN 415
            |.|   ||.|.:.:|   |..:|..:..|||:||..:..:|||:.|.|....:.........||.
Mouse   575 FALGADGAPEARAQH---YLELGAEIARTCHESYNRTYVKLGPEAFRFDGGVEAIATRQNEKYYI 636

  Fly   416 LRPEVAETYLVLWRITHHPQYRLWGLEMVQAIEKYCRMPYGYTGVMDVNNVTSEPDDVQGSFFLG 480
            |||||.|||:.:||:||.|:||.|..|.|:|:|.:||:..||:|:.||.......||||.||||.
Mouse   637 LRPEVIETYMYMWRLTHDPKYRTWAWEAVEALESHCRVNGGYSGLRDVYIARESYDDVQQSFFLA 701

  Fly   481 STLKYLYLLFSDDDVVSLEQWVFNSAGHFLPI 512
            .|||||||:|||||::.||.|:||:..|..||
Mouse   702 ETLKYLYLIFSDDDLLPLEHWIFNTEAHPFPI 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IcNP_733331.1 Glyco_hydro_47 78..512 CDD:279825 186/452 (41%)
Man1aXP_006512631.1 SdhA <178..305 CDD:393461 16/42 (38%)
Glyco_hydro_47 295..733 CDD:366693 186/452 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839762
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54359
OrthoDB 1 1.010 - - D263455at33208
OrthoFinder 1 1.000 - - FOG0001280
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100239
Panther 1 1.100 - - O PTHR11742
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X635
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.720

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