DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ic and man1c1

DIOPT Version :9

Sequence 1:NP_733331.1 Gene:alpha-Man-Ic / 318624 FlyBaseID:FBgn0051202 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_031752782.1 Gene:man1c1 / 100485889 XenbaseID:XB-GENE-6076350 Length:617 Species:Xenopus tropicalis


Alignment Length:473 Identity:201/473 - (42%)
Similarity:306/473 - (64%) Gaps:12/473 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 ESFQKNIP----SNDNSLKDMNPDDMRAKIKEMMMHAWRNYARVVWGTNEFRPISRRVHFGGDFA 110
            ::|:||:.    .:.:..||::..:.|.|:||||:.||.:|.:..||.||.||:::..|||..|.
 Frog   141 KTFRKNLKYPPMGSKHEPKDIDMQEKRKKVKEMMIFAWNSYKQYAWGENELRPLTKDGHFGSLFG 205

  Fly   111 TYKLGATIIESLDTLHLMGLNKELRRSRDWIEKSFHLDRVDEALSVYELTSRLLCPMLTLYSLTG 175
            ..| ||||:::||||.:||:.:|...::.|||.|..|:...|| |::|:..|.:..:|:.|.|:|
 Frog   206 GLK-GATIVDALDTLFIMGMKEEFEEAQKWIETSLDLNVNGEA-SLFEVNIRYIGGLLSAYFLSG 268

  Fly   176 DSLYMDKAIHIADKILPAFDTPTGIPRRLVVPKEGSTLTKYLSDI--SRTSEFGSLHLEFYYLSE 238
            ..::.||||.:.:|:||||.|||||||.::....|.|.:...:..  |..:|||:|||||..|||
 Frog   269 KEVFRDKAIGLGNKLLPAFSTPTGIPRGIINLGNGLTWSWGWASAGSSILAEFGTLHLEFVQLSE 333

  Fly   239 VSGYPVYRERVDAIREILAKTTRPNGLYPNAYCTKFGKWENYNCSMHRL----YDTLLKSWIQSG 299
            :||..::.|:|:.||::|:|..:|:|||||.:....|.|..::.|:..|    |:.|:|||:.|.
 Frog   334 LSGNTIFTEKVNGIRKLLSKIEKPHGLYPNYFSPISGNWVQHHVSLGGLGDSFYEYLIKSWLMSA 398

  Fly   300 RTDTQNADTFKEAMLAVAQNLVVINPEDVTYVSTFRNGTLFHRMRHSDCFAGGLFVLGAAETQMK 364
            |.|.:....:.:|:.|:..:|:..:|..:||::.:|.|.|.|:|.|..|||.|:|.|||.:...:
 Frog   399 RQDNEAKSMYYDALEAIETHLIRKSPGGLTYIAEWRGGILDHKMGHLTCFAAGMFALGARDAPAQ 463

  Fly   365 HWEKYAHIGIGLTDTCHDSYWSSPTRLGPDTFAFTEESQQEIEPLQRNYYNLRPEVAETYLVLWR 429
            ..:.|..:...:.:|||:||..:.|:|||:.|.|...::.....|...||.|||||||:|:.|||
 Frog   464 KRDHYMELAAEIANTCHESYARTDTKLGPEVFRFDFGAEATASRLSERYYMLRPEVAESYVYLWR 528

  Fly   430 ITHHPQYRLWGLEMVQAIEKYCRMPYGYTGVMDVNNVTSEPDDVQGSFFLGSTLKYLYLLFSDDD 494
            :||:|:||.||.|:|||:|||||:..|::|:.||.:.:...|:||.|||:..||||||||||:||
 Frog   529 LTHNPKYREWGWEIVQALEKYCRIESGFSGIRDVYSTSPNHDNVQQSFFMSETLKYLYLLFSEDD 593

  Fly   495 VVSLEQWVFNSAGHFLPI 512
            ::|||.||||:..|.|||
 Frog   594 LLSLEDWVFNTEAHPLPI 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IcNP_733331.1 Glyco_hydro_47 78..512 CDD:279825 190/439 (43%)
man1c1XP_031752782.1 Glyco_hydro_47 173..611 CDD:396217 190/439 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D263455at33208
OrthoFinder 1 1.000 - - FOG0001280
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11742
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X635
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

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