Sequence 1: | NP_001036733.1 | Gene: | GluRIIE / 318623 | FlyBaseID: | FBgn0051201 | Length: | 897 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001072565.1 | Gene: | grik5-like.1 / 780020 | XenbaseID: | XB-GENE-5860197 | Length: | 479 | Species: | Xenopus tropicalis |
Alignment Length: | 441 | Identity: | 148/441 - (33%) |
---|---|---|---|
Similarity: | 229/441 - (51%) | Gaps: | 29/441 - (6%) |
- Green bases have known domain annotations that are detailed below.
Fly 423 IILLSVPNKPYAQLVETYKQLEGNSQYEGYGVDLIKELADKLGFNFTF--VNGGNDYGSYNKSTN 485
Fly 486 ESTGMLREIMTGRADLAITDLTITSEREQALDFTIPFMNLGIAILYLKPQ-KATPELFTFMDPFS 549
Fly 550 EEVWWFLGFSFLGVSLSFFILGRLSPSEWDNPYPCIEEPEELENQFTLGNSIWFTTGALLQQGSE 614
Fly 615 IGPKALSTRTVASFWWFFTLIVVSSYTANLAAFLTIEKPQSL-INSVDDLADNKDGVVYGAKKTG 678
Fly 679 STRNFFMTSAEERYKKMNKFMSE-NPQYLTEDNMEGVNRVKTNTHYAFLMESTSIEYNTKRECNL 742
Fly 743 KKIGDALDEKGYGIAMRKDWPHRGKFNNALLELQEQGVLEKMKNKWWNEVGTGICATKEDAPDAT 807
Fly 808 PLDMNNLEGVFFVLLVGSCCALLYGIISWVLFVMKKAHHYRVPLRDALKEE 858 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIE | NP_001036733.1 | PBP1_iGluR_Kainate | 42..396 | CDD:107377 | |
ANF_receptor | 51..382 | CDD:279440 | |||
PBP2_iGluR_Kainate | 419..790 | CDD:270432 | 132/371 (36%) | ||
Lig_chan | 551..824 | CDD:278489 | 91/274 (33%) | ||
grik5-like.1 | NP_001072565.1 | PBP2_iGluR_non_NMDA_like | 41..396 | CDD:270403 | 132/371 (36%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |