DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluRIIE and GRIK5

DIOPT Version :9

Sequence 1:NP_001036733.1 Gene:GluRIIE / 318623 FlyBaseID:FBgn0051201 Length:897 Species:Drosophila melanogaster
Sequence 2:XP_011525167.1 Gene:GRIK5 / 2901 HGNCID:4583 Length:982 Species:Homo sapiens


Alignment Length:880 Identity:291/880 - (33%)
Similarity:439/880 - (49%) Gaps:81/880 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QSLESVPIGLLTDQNT--------------EQMNIVFDHAIDV-ANQEVGTSLTSLKEEVNYGDA 83
            |.|.|:.:..:.|..|              ||:|.:    |:| |...|...:..|:.:    ..
Human    19 QVLSSLRMAAILDDQTVCGRGERLALALAREQINGI----IEVPAKARVEVDIFELQRD----SQ 75

  Fly    84 YQSYGKLCRMLETGIAGVFGPSSRHTAVHLMS-ICDAMDIPHIYSYMSENAE-------GFNLHP 140
            |::...:|::|..|:..|.||||...:...:| ||...:||||.....|...       ..:|:|
Human    76 YETTDTMCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYP 140

  Fly   141 HPADLAKALYSLITEFNWTRFIFLYESAEYLNILNELTTMLGKSGTVITVLRYDMQLNGNYKQVL 205
            ...|::.|:..::..||:.....:...||.|..|.||......|...::|...|...:..  .:|
Human   141 SNEDVSLAVSRILKSFNYPSASLICAKAECLLRLEELVRGFLISKETLSVRMLDDSRDPT--PLL 203

  Fly   206 RRVRKSVDNRIVVVGSSETMPEFLNQAQQVGIINEDYKYIIGNLDFHSFDLEEYKYSEANITGLR 270
            :.:|....:.|::..::......|.:|.::|:.:..||||:..:||....|:......:||.|..
Human   204 KEIRDDKVSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPILHLDGIVEDSSNILGFS 268

  Fly   271 LFSPEKMAVKELLMKLGYPTDQDEFRNGSCPITVEMALTYDAVQLFAQTLKNL------PFKPMP 329
            :|:.......|.:..|.....::...:......:..||.:|||.:....::.|      ..||:.
Human   269 MFNTSHPFYPEFVRSLNMSWRENCEASTYLGPALSAALMFDAVHVVVSAVRELNRSQEIGVKPLA 333

  Fly   330 QNCSQRTESVRDDGSSFKNYMRTLRLTDRLLTGPIYFEG-NVRKGYHLDVIELQPSGIVKVGTWD 393
              |:  :.::...|:|..||:|.:....  |||.:.|.. ..|..|.|.::|....|..::|.| 
Human   334 --CT--SANIWPHGTSLMNYLRMVEYDG--LTGRVEFNSKGQRTNYTLRILEKSRQGHREIGVW- 391

  Fly   394 EDRQYRPQRLAPTTAQFD-SVDNSLANKTFIILLSVPNKPYAQLVETYKQLEGNSQYEGYGVDLI 457
                |..:.||......| ::..:|||||.::...:.| ||......::.|.||.::||:.||::
Human   392 ----YSNRTLAMNATTLDINLSQTLANKTLVVTTILEN-PYVMRRPNFQALSGNERFEGFCVDML 451

  Fly   458 KELADKLGFNF--TFVNGGNDYGSYNKSTNES-TGMLREIMT-GRADLAITDLTITSEREQALDF 518
            :|||:.|.|.:  ..|..|. ||:  ...|.| |||:.|::. .:||||:...|||:|||:.:||
Human   452 RELAELLRFRYRLRLVEDGL-YGA--PEPNGSWTGMVGELINRQKADLAVAAFTITAEREKVIDF 513

  Fly   519 TIPFMNLGIAILYLKPQKATPELFTFMDPFSEEVWWFLGFSFLGVSLSFFILGRLSPSEWDNPYP 583
            :.|||.|||:|||.......|..|:|:||||..||.|:..::|.||...|:..||||.||.||:|
Human   514 SKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHP 578

  Fly   584 CIE-EPEELENQFTLGNSIWFTTGALLQQGSEIGPKALSTRTVASFWWFFTLIVVSSYTANLAAF 647
            |:. .|..||||:|||||:||..|..:||||||.|:|||||.|:..||.||||::||||||||||
Human   579 CLRARPHILENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAF 643

  Fly   648 LTIEKPQSLINSVDDLADNKDGVVYGAKKTGSTRNFFMTSAEERYKKM-NKFMSENPQYLTEDNM 711
            ||:::.:..:.|.||||| :..:.||....|||..||..|..:.|::| |...|:.|....:...
Human   644 LTVQRMEVPVESADDLAD-QTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTE 707

  Fly   712 EGVNRVKTNTHYAFLMESTSIEYNTKRECNLKKIGDALDEKGYGIAMRKDWPHRGKFNNALLELQ 776
            ||:.|| .|:.||||:|||..||:.:..|||.:||..||.|||||.|....|.|.:...|:|:||
Human   708 EGIARV-LNSRYAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 771

  Fly   777 EQGVLEKMKNKWWNEVGTGICATKEDAPDATPLDMNNLEGVFFVLLVGSCCALLYGIISWVLFVM 841
            |...||.:|.|||.   .|.|..:|| ..|..|.|.|:.|:|.||:.|...|:...::.::....
Human   772 ENNRLEILKRKWWE---GGRCPKEED-HRAKGLGMENIGGIFIVLICGLIIAVFVAVMEFIWSTR 832

  Fly   842 KKAHHYRVPL-------------RDALKEEFQFVI 863
            :.|.....|.             |..|||....::
Human   833 RSAESEETPALHPAACQCSALGPRTPLKEPSMLLV 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRIIENP_001036733.1 PBP1_iGluR_Kainate 42..396 CDD:107377 86/383 (22%)
ANF_receptor 51..382 CDD:279440 80/346 (23%)
PBP2_iGluR_Kainate 419..790 CDD:270432 175/376 (47%)
Lig_chan 551..824 CDD:278489 132/274 (48%)
GRIK5XP_011525167.1 PBP1_iGluR_Kainate_KA1_2 25..399 CDD:107389 88/394 (22%)
ANF_receptor 42..379 CDD:279440 80/352 (23%)
Periplasmic_Binding_Protein_Type_2 414..785 CDD:304360 175/376 (47%)
Lig_chan 546..816 CDD:278489 132/275 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155979
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60082
OrthoDB 1 1.010 - - D60688at33208
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100167
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.760

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