DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluRIIE and GRID2

DIOPT Version :9

Sequence 1:NP_001036733.1 Gene:GluRIIE / 318623 FlyBaseID:FBgn0051201 Length:897 Species:Drosophila melanogaster
Sequence 2:XP_011530195.2 Gene:GRID2 / 2895 HGNCID:4576 Length:1035 Species:Homo sapiens


Alignment Length:905 Identity:224/905 - (24%)
Similarity:395/905 - (43%) Gaps:170/905 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 KLCRMLETGIAGVFGPSSRHTAVHLMSICDAMDIPHIYSYMSENAEG------------------ 135
            |.|.::..||..:.......:|..|.|:.|||.|||:  ::..:..|                  
Human    93 KTCELMNQGILALVSSIGCTSAGSLQSLADAMHIPHL--FIQRSTAGTPRSGCGLTRSNRNDDYT 155

  Fly   136 FNLHPHPADLAKALYSLITEFNWTRFIFLYESAEYLNILNELTTMLGKSGTVITVLRYDMQLN-- 198
            .::.| |..|...:..::||:.|.:||..|:|...:..:.|....:.:.|..:.:.:.:..:|  
Human   156 LSVRP-PVYLHDVILRVVTEYAWQKFIIFYDSEYDIRGIQEFLDKVSQQGMDVALQKVENNINKM 219

  Fly   199 -------------GNYKQVLRRVRKSVDNRIVVVGSSETMPEFLNQAQQVGIINEDYKYIIGNLD 250
                         ..|:..|||.        ::|.:..|...|:.:..:..::..|..:||.|.:
Human   220 ITTLFDTMRIEELNRYRDTLRRA--------ILVMNPATAKSFITEVVETNLVAFDCHWIIINEE 276

  Fly   251 FHSFDLEE-YKYSEANITGLRLFSPEKMAVKELLMK--------LGYPTDQDEFRNGSCPITVEM 306
            .:..|::| .:.|...:|.:|...|....:.:...:        |..|.|         |....|
Human   277 INDVDVQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSTLCDPKD---------PFAQNM 332

  Fly   307 ALT----YDAVQL----FAQTLKNLPFKPMPQ-NCSQRTESVRDDGSSFKNYMRTLRLTDRLLTG 362
            .::    ||.|.|    |.:.|::..:..|.. :|.::.......|.|....::...::.  |||
Human   333 EISNLYIYDTVLLLANAFHKKLEDRKWHSMASLSCIRKNSKPWQGGRSMLETIKKGGVSG--LTG 395

  Fly   363 PIYF-EGNVRKGYHLDVI----------------ELQPSGIV-----KVGTWDEDRQYRPQRLAP 405
            .:.| |.......|.:::                .::|.|..     ::|.|:           |
Human   396 ELEFGENGGNPNVHFEILGTNYGEELGRGVRKNERIRPQGSTGKIWPQLGCWN-----------P 449

  Fly   406 TTAQFDSV-DNSLANK---TFIILLSVPNKPYAQLVETYKQLEGNSQYEGYGVDLIKELADKLGF 466
            .|....|: |..|.|.   ..:.:::|..:|:..:.|..  |....:|:|:.:|::..|::.|||
Human   450 VTGLNGSLTDKKLENNMRGVVLRVVTVLEEPFVMVSENV--LGKPKKYQGFSIDVLDALSNYLGF 512

  Fly   467 NF-TFVNGGNDYGSYNKSTNESTGMLREIMTGRADLAITDLTITSEREQALDFTIPFMNLGIAIL 530
            |: .:|...:.||| .:......|::.|::..|||:.|:.||||.:||..:|||..:|:..:.:|
Human   513 NYEIYVAPDHKYGS-PQEDGTWNGLVGELVFKRADIGISALTITPDRENVVDFTTRYMDYSVGVL 576

  Fly   531 YLKPQKATPELFTFMDPFSEEVWWFLGFSFLGVSLSFFILGRLSPSEWDNPYPCIEEPEELENQF 595
            ..:.:| |.::|..:.||...:|..:..:.|.|.|..::|      .|.|| |.::.......  
Human   577 LRRAEK-TVDMFACLAPFDLSLWACIAGTVLLVGLLVYLL------NWLNP-PRLQMGSMTST-- 631

  Fly   596 TLGNSIWFTTGALLQQGSEIGPKALSTRTVASFWWFFTLIVVSSYTANLAAFLTIEKPQSLINSV 660
            ||.||:||..|:.:|||.|:....|:||.:...||.|.|||:|||||||||||||.:.:|.|.|:
Human   632 TLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSL 696

  Fly   661 DDLADNKDGVVYGAKKTGSTRNFFMTSA---EERYKKMNKFMSE----------NPQYLTEDNM- 711
            .||:...: :.||.         .:.||   ..|.|.:|.|..:          |....:|:|: 
Human   697 QDLSKQTE-IPYGT---------VLDSAVYEHVRMKGLNPFERDSMYSQMWRMINRSNGSENNVL 751

  Fly   712 ---EGVNRVKTNTHYAFLMESTSIEY--NTKRECNLKKIGDALDEKGYGIAMRKDWPHRGKFNNA 771
               .|:.:||.. :|||:.::..:||  ....:|:...||:.:.::|||||::...|:|..|:..
Human   752 ESQAGIQKVKYG-NYAFVWDAAVLEYVAINDPDCSFYTIGNTVADRGYGIALQHGSPYRDVFSQR 815

  Fly   772 LLELQEQGVLEKMKNKWWNEVG-TGICATKEDAPDATPLDMNNLEGVFFVLLVG---SCCALLYG 832
            :||||:.|.::.:|:|||.:.| ..:.::.:.......||:.:..|||.:|..|   ||...:  
Human   816 ILELQQNGDMDILKHKWWPKNGQCDLYSSVDTKQKGGALDIKSFAGVFCILAAGIVLSCFIAM-- 878

  Fly   833 IISWVLFVMKKAHHYRVPLRDALKEEFQFVIDFNNYVRVLKNSASIYSRSRQSSMSVASV 892
            :.:|    ..|....|||.::..||     ||..:..|.: ||......|.....|.:|:
Human   879 LETW----WNKRKGSRVPSKEDDKE-----IDLEHLHRRV-NSLCTDDDSPHKQFSTSSI 928

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRIIENP_001036733.1 PBP1_iGluR_Kainate 42..396 CDD:107377 69/379 (18%)
ANF_receptor 51..382 CDD:279440 65/360 (18%)
PBP2_iGluR_Kainate 419..790 CDD:270432 124/393 (32%)
Lig_chan 551..824 CDD:278489 93/292 (32%)
GRID2XP_011530195.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155949
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.740

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