Sequence 1: | NP_001036733.1 | Gene: | GluRIIE / 318623 | FlyBaseID: | FBgn0051201 | Length: | 897 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038951440.1 | Gene: | Grin2d / 24412 | RGDID: | 2740 | Length: | 1334 | Species: | Rattus norvegicus |
Alignment Length: | 908 | Identity: | 202/908 - (22%) |
---|---|---|---|
Similarity: | 358/908 - (39%) | Gaps: | 178/908 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 59 AIDVANQEVGTSLTSLKEEVNYGDAYQSYGKLCRMLETGI---AGVFGPSSRHTAV----HLMSI 116
Fly 117 CDAMDIPHIYS----YMSENAEG---FNLHPHPADLAKALYSLITEFNWTRFIFLYESA------ 168
Fly 169 -EYLNILNE-----------LTTMLGKSGTVITVLRYDMQLNGNYKQVLRRVRKSVDNRIVVVGS 221
Fly 222 SETMPEFLNQAQQVGIINEDYKYIIGNLDFHSFDLEEYKYSEANITGLRLFSPEKMAV--KELLM 284
Fly 285 KLGYPTDQDEFRNGSCPITVEMALTYDA-VQLFAQ----TLKNLPFKP-MPQNCSQRTESVRDDG 343
Fly 344 SSFKNYMRTLRLTDRLLTGPIYFEGNVRKGYHLDVIELQPSGIV----------KVGTWDEDRQY 398
Fly 399 RPQRLAPTTAQF-DSVDN-------SLANKTFIILL------------SVPNKPYAQLVETYKQL 443
Fly 444 EGNSQYE-----GYGVDLIKELADKLGFNFTFVNGGNDYGSYNKSTNES-TGMLREIMTGRADLA 502
Fly 503 ITDLTITSEREQALDFTIPFMNLGIAILYLKPQ-KATPELFTFM---------DPFSEEVWWFLG 557
Fly 558 FSFLG-VSLSFFILGRLSPSEWDNPYPCIEEPEELENQFTLGNSIWFTTGALLQQGSEI-GPKAL 620
Fly 621 STRTVASFWWFFTLIVVSSYTANLAAFLTIEKPQSLINSVDDLADNK--------DGVVYGAKKT 677
Fly 678 GSTRNFFMTSAEERYKKMNKFMSENPQYLTEDNMEGVNRVKTNTHYAFLMESTSIEYNTKRE--C 740
Fly 741 NLKKIGD--ALDEKGYGIAMRKDWPHRGKFNNALLELQEQGVLEKMKNKWWNEVGTGICATKEDA 803
Fly 804 PDATPLDMNNLEGVFFVLLVGSCCALLYGIISWVLFVMKKAHHYRVPLRDALKEEFQFVIDFN 866 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIE | NP_001036733.1 | PBP1_iGluR_Kainate | 42..396 | CDD:107377 | 71/386 (18%) |
ANF_receptor | 51..382 | CDD:279440 | 65/362 (18%) | ||
PBP2_iGluR_Kainate | 419..790 | CDD:270432 | 106/412 (26%) | ||
Lig_chan | 551..824 | CDD:278489 | 75/286 (26%) | ||
Grin2d | XP_038951440.1 | PBP1_iGluR_NMDA_NR2 | 46..410 | CDD:380601 | 71/391 (18%) |
PBP2_iGluR_NMDA_Nr2 | 427..838 | CDD:270436 | 110/430 (26%) | ||
PHA03307 | <1125..>1312 | CDD:223039 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166349875 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.740 |