Sequence 1: | NP_001036733.1 | Gene: | GluRIIE / 318623 | FlyBaseID: | FBgn0051201 | Length: | 897 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_036706.1 | Gene: | Grin2b / 24410 | RGDID: | 2738 | Length: | 1482 | Species: | Rattus norvegicus |
Alignment Length: | 898 | Identity: | 203/898 - (22%) |
---|---|---|---|
Similarity: | 369/898 - (41%) | Gaps: | 189/898 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 31 DNYQSLESVP-IGLLTDQNTEQMNIVFDHAIDVANQEVGTSLTSLKEE------VNYGDAYQSYG 88
Fly 89 KLCRMLE-------TGIAGVFGPSSRHTAVHLMSICDAMDIPHIYSYMSENAEGFNLHPHPADLA 146
Fly 147 KALYSLITEFNWTRFIFLYESA---EYLNILNELTTMLGKS---GTVITVLRYDMQLNGNYKQVL 205
Fly 206 RRVRKSVDNRIVVVGSSETMPEFLNQAQQVGIINEDYKYIIGNLDFHSFDLEEYKYSEANITGLR 270
Fly 271 LFSPEKMAVKELLMKLGYPTDQDEFRNGSCPITVEMALTYDAVQLFAQTLKNLPFKPMPQNCSQR 335
Fly 336 TESVRDDGSSFKNYMRTLRLTDRLLTGPIYFEGNVRKGYHLDVIELQPSGIV----------KVG 390
Fly 391 TWDED----RQYRPQRLAPTTAQFDSVDNSLANKTFIILLSVPNKPYAQLVETYKQLEGNSQ--- 448
Fly 449 -----------------------YEGYGVDLIKELADKLGFNFTFVNGGNDYGSYNKSTNES-TG 489
Fly 490 MLREIMTGRADLAITDLTITSEREQALDFTIPFMNLGIAILYLKPQKATPELFTFMDPFSEEVWW 554
Fly 555 FLGFSFLGVS-LSFFILGRLSPSEWDNPYPCIEEPEELEN-QFTLGNSIWFTTGALLQQGSEI-G 616
Fly 617 PKALSTRTVASFWWFFTLIVVSSYTANLAAFLTIEKPQSLINSVDDLADNK--------DGVVYG 673
Fly 674 AKKTGSTRNFFMTSAEERYKKMNKFMSENPQYLTEDNMEGVN----RVKTNTHYAFLMESTSIEY 734
Fly 735 NTKRE--CNLKKIGD--ALDEKGYGIAMRKDWPHRGKFNNALLELQEQGVLEKMKNKWWNEVGTG 795
Fly 796 ICATKEDAPDATPLDMNNLEGVFFVLLVGSCCALLYGIISWVLFVMKKAHHYR 848 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIE | NP_001036733.1 | PBP1_iGluR_Kainate | 42..396 | CDD:107377 | 71/386 (18%) |
ANF_receptor | 51..382 | CDD:279440 | 65/349 (19%) | ||
PBP2_iGluR_Kainate | 419..790 | CDD:270432 | 106/416 (25%) | ||
Lig_chan | 551..824 | CDD:278489 | 82/291 (28%) | ||
Grin2b | NP_036706.1 | PBP1_iGluR_NMDA_NR2 | 33..393 | CDD:107373 | 76/404 (19%) |
PBP2_iGluR_NMDA_Nr2 | 403..803 | CDD:270436 | 112/430 (26%) | ||
HisJ | <459..>542 | CDD:223904 | 25/85 (29%) | ||
Lig_chan | 557..829 | CDD:278489 | 83/294 (28%) | ||
Pore-forming. /evidence=ECO:0000269|PubMed:24876489, ECO:0000305|PubMed:24876489 | 604..623 | 3/18 (17%) |