Sequence 1: | NP_001036733.1 | Gene: | GluRIIE / 318623 | FlyBaseID: | FBgn0051201 | Length: | 897 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_036705.3 | Gene: | Grin2a / 24409 | RGDID: | 2737 | Length: | 1464 | Species: | Rattus norvegicus |
Alignment Length: | 982 | Identity: | 224/982 - (22%) |
---|---|---|---|
Similarity: | 390/982 - (39%) | Gaps: | 246/982 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 54 IVFDHAIDVANQEVGT-----SLTSLKEEVNY-------GDAYQSYGKLCRMLE-TGIAG-VFGP 104
Fly 105 SSRHTAVHLM--SICDAMDIP----H-----IYSYMSENAEGFNLHPHPADLAKALYSLITEFNW 158
Fly 159 TRF-----IFLYESAEYLNILNELTTMLGKSGTVITVLRYDMQ----LNGNYKQV-----LRRVR 209
Fly 210 KSVDNRIVVVGSSETMPEFLNQAQQVGIINEDYKYII-----GNLD---------FHSFDLEEYK 260
Fly 261 YS-EANI-TGLRLFSPEKMAVKELLMKLGYPTDQDEFRNGSCPITVEMALTYDAVQLFAQTLKNL 323
Fly 324 PFKPMPQNCSQRTESVRDDGSSFKNYMRTLRLTDRLLTGPIYFEGNVRKGYHLDVIELQPSGIV- 387
Fly 388 ---------KVGTWDEDRQYRPQRLAPTTAQFDSV---DNSLANKT-----FIIL---------- 425
Fly 426 --LSVPNKPYAQLVETYKQLEGNSQYE---------GYGVDLIKELADKLGFNFTFVNGGNDYGS 479
Fly 480 YNKSTNES-TGMLREIMTGRADLAITDLTITSEREQALDFTIPFMNLGIAILYLKPQKATPELFT 543
Fly 544 FMDPFSEEVWWFLGFSFLGVS-LSFFILGRLSPSEWDNPYPCIEEPEELENQFTLGNSIWFTTGA 607
Fly 608 LLQQGSEI-GPKALSTRTVASFWWFFTLIVVSSYTANLAAFLTIEKPQSLINSVDDLADNK---- 667
Fly 668 ----DGVVYGAKKTGST-RNFFMTSAEERYKKMNKFMSENPQYLTEDNMEGVN----RVKTNTHY 723
Fly 724 AFLMESTSIEYNTKRE--CNLKKIGDA--LDEKGYGIAMRKDWPHRGKFNNALLELQEQGVLEKM 784
Fly 785 KNKWWNEVGTGICATKEDAPDATPLDMNNLEGVFFVLLVGSCCALL----------------YGI 833
Fly 834 IS---WVLFVMKKA-----HHYRVPLRDALKEEFQFVIDFN------NYVRVLKNSASIYSRSRQ 884
Fly 885 SSMSVAS 891 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIE | NP_001036733.1 | PBP1_iGluR_Kainate | 42..396 | CDD:107377 | 79/406 (19%) |
ANF_receptor | 51..382 | CDD:279440 | 73/382 (19%) | ||
PBP2_iGluR_Kainate | 419..790 | CDD:270432 | 112/416 (27%) | ||
Lig_chan | 551..824 | CDD:278489 | 84/291 (29%) | ||
Grin2a | NP_036705.3 | PBP1_iGluR_NMDA_NR2 | 32..392 | CDD:107373 | 79/416 (19%) |
PBP2_iGluR_NMDA_Nr2 | 403..802 | CDD:270436 | 119/430 (28%) | ||
HisJ | <458..>541 | CDD:223904 | 26/85 (31%) | ||
Glutamate binding. /evidence=ECO:0000269|PubMed:16281028, ECO:0007744|PDB:2A5S, ECO:0007744|PDB:2A5T, ECO:0007744|PDB:4NF4, ECO:0007744|PDB:4NF8, ECO:0007744|PDB:5I56, ECO:0007744|PDB:5I57, ECO:0007744|PDB:5I58, ECO:0007744|PDB:5I59, ECO:0007744|PDB:5JTY | 511..513 | 0/1 (0%) | |||
Lig_chan | 556..828 | CDD:278489 | 84/292 (29%) | ||
Pore-forming. /evidence=ECO:0000250|UniProtKB:B7ZSK1 | 599..620 | 6/20 (30%) |