Sequence 1: | NP_001036733.1 | Gene: | GluRIIE / 318623 | FlyBaseID: | FBgn0051201 | Length: | 897 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001263284.1 | Gene: | Grin3a / 242443 | MGIID: | 1933206 | Length: | 1135 | Species: | Mus musculus |
Alignment Length: | 853 | Identity: | 170/853 - (19%) |
---|---|---|---|
Similarity: | 331/853 - (38%) | Gaps: | 167/853 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 82 DAYQSYGKLCR-MLETGIAGVFG-PSSRHTAVHLMSICDAMDIP------HIYSYMSENAEGFNL 138
Fly 139 H---------PHPADLAKALYSLITEFNW--------------TRFIFLYE--SAEYLNILNELT 178
Fly 179 TMLGKSGTVITVLRYDMQLNGNYKQVLRRVRKSVDNRIVVVGSSETMPEFLNQAQQVGIINEDYK 243
Fly 244 YIIGNLDFHSFDLEEYKYSEANITGLRLFSPEKMAVKELLMKLGYPTDQDEFRNGSCPITVEMAL 308
Fly 309 TYDAVQLFAQTL-------KNLPFKPMPQNCSQRTESVRDDGSSFKNYMRTLRLTDRLLTGPIYF 366
Fly 367 EGNV----RKGYHLDVIELQPSG---IVKVGTWDEDRQYRPQRLAPTTAQFDSVDNSLANKTFII 424
Fly 425 LLSVPNKPY--------------------------AQLVETYKQLEGNSQ----------YEGYG 453
Fly 454 VDLIKELADKLGFNF-TFVNGGNDYGSYNKSTNESTGMLREIMTGRADLAITDLTITSEREQALD 517
Fly 518 FTIPFMNLGIAILYLKPQKATPELFTFMDPFSEEVWWFLG-FSFLGVSLSFFILGRLSPSEWDNP 581
Fly 582 YPCIEEPEELENQFTLGNSIWFTTGALLQQGSEI-GPKALSTRTVASFWWFFTLIVVSSYTANLA 645
Fly 646 AFLTIEKPQSLINSVDD--LADNKDGVVYGAKKTGSTRNFFMTSAEERYKKMNKF----MSENPQ 704
Fly 705 YLTEDNMEGVNRVKTNTHYAFLMESTSIEYNTK--RECNLKKIGDALDEKGYGIAMRKDWPHRGK 767
Fly 768 FNNALLELQEQGVLEKMKNKWWNEVGTGICATKEDAPDAT-PLDMNNLEGVFFVLLVGSCCALLY 831
Fly 832 GIISWVLF 839 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIE | NP_001036733.1 | PBP1_iGluR_Kainate | 42..396 | CDD:107377 | 62/360 (17%) |
ANF_receptor | 51..382 | CDD:279440 | 58/343 (17%) | ||
PBP2_iGluR_Kainate | 419..790 | CDD:270432 | 94/417 (23%) | ||
Lig_chan | 551..824 | CDD:278489 | 63/283 (22%) | ||
Grin3a | NP_001263284.1 | PBP1_iGluR_NMDA_NR3 | 30..497 | CDD:107372 | 63/369 (17%) |
PBP2_iGluR_NMDA_Nr3 | 512..908 | CDD:270438 | 92/415 (22%) | ||
Lig_chan | 676..942 | CDD:278489 | 63/284 (22%) | ||
PPP2CB binding site. /evidence=ECO:0000250|UniProtKB:Q9R1M7 | 951..987 | 0/6 (0%) | |||
GIT1-binding. /evidence=ECO:0000250|UniProtKB:Q9R1M7 | 1082..1115 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167846385 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |