Sequence 1: | NP_001036733.1 | Gene: | GluRIIE / 318623 | FlyBaseID: | FBgn0051201 | Length: | 897 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017952374.2 | Gene: | grin3b / 100497172 | XenbaseID: | XB-GENE-990106 | Length: | 1005 | Species: | Xenopus tropicalis |
Alignment Length: | 848 | Identity: | 180/848 - (21%) |
---|---|---|---|
Similarity: | 334/848 - (39%) | Gaps: | 137/848 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 90 LCRML-ETGIAGVFG-PSSRHTAVHLMSICDAMDIPHIYSYMSE------NAEGFNL----HPHP 142
Fly 143 ADLAKALYSLITEFNWTRFIFL----YESAEYLNILNELTTMLGKSGTVITVLRYDMQLNGNYKQ 203
Fly 204 VLRRVRKSVDNRIVVVGSSETMPEFL-NQAQQVGIINEDYKYIIGNLDFHSFDLEEYKYSEANIT 267
Fly 268 GLRLFSPEKMAVKELLMKLGYPTDQDEFRNGSCPITVEMALTYDAVQLFAQTLKNLPFKPMPQNC 332
Fly 333 S-QRTESVRDDGSSFKNYMRTLRLTDRLLTGPIYFEGN-VRKGYHLDVIELQPSGI-----VKVG 390
Fly 391 TWDEDR--------QYRPQRLAPT---------------------TAQFDS----------VDNS 416
Fly 417 LANKTFI-ILLSVPNKPYAQLVETYKQLEGNSQYEGYGVDLIKELADKLGFNF-TFVNGGNDYGS 479
Fly 480 YNKSTNESTGMLREIMTGRADLAITDLTITSEREQALDFTIPFMNLGIAILYLKPQKATPELFTF 544
Fly 545 MDPFSEEVW--WFLGFSFLGVSLSFFILGRLSPSEWDNPYPCIEEPEELENQFTLGNSIWFTTGA 607
Fly 608 LL-QQGSEIGPKALSTRTVASFWWFFTLIVVSSYTANLAAFLTIEKPQSLINSVDD--LADNKDG 669
Fly 670 VVYGAKKTGSTRNFFMTSAEERYKKMNKFMSENPQYLTEDNMEGVNRVKTN--THYAFLMESTSI 732
Fly 733 EYNTK--RECNLKKIGDALDEKGYGIAMRKDWPHRGKFNNALLELQEQGVLEKMKNKWWNEV--G 793
Fly 794 TGICATKEDAPDATPLDMNNLEGVFFVLLVGSCCALLYGIISWVLFVMKKAHHYRVPLRDALKEE 858
Fly 859 FQF 861 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIE | NP_001036733.1 | PBP1_iGluR_Kainate | 42..396 | CDD:107377 | 61/329 (19%) |
ANF_receptor | 51..382 | CDD:279440 | 56/310 (18%) | ||
PBP2_iGluR_Kainate | 419..790 | CDD:270432 | 96/381 (25%) | ||
Lig_chan | 551..824 | CDD:278489 | 65/283 (23%) | ||
grin3b | XP_017952374.2 | PBP1_iGluR_NMDA_NR3 | 29..402 | CDD:380600 | 61/337 (18%) |
PBP2_iGluR_NMDA_Nr3 | 418..814 | CDD:270438 | 98/418 (23%) | ||
Lig_chan | 582..848 | CDD:395014 | 65/284 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |