Sequence 1: | NP_001036733.1 | Gene: | GluRIIE / 318623 | FlyBaseID: | FBgn0051201 | Length: | 897 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004912781.1 | Gene: | gria1 / 100127569 | XenbaseID: | XB-GENE-995621 | Length: | 903 | Species: | Xenopus tropicalis |
Alignment Length: | 858 | Identity: | 292/858 - (34%) |
---|---|---|---|
Similarity: | 450/858 - (52%) | Gaps: | 83/858 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 ISVNWAQYENFGG-YDNYQSLESVPIGLLTDQNTEQMNIVFDHAIDVANQEVGTSLTSLKEEVNY 80
Fly 81 GDAYQSYGKLCRMLETGIAGVFGPSSRHTAVHLMSICDAMDIPHIY-SYMSENAEGFNLHPHPAD 144
Fly 145 LAKALYSLITEFNWTRFIFLYESAEYLNILNELTTMLGKSGTVITVLRYDMQLNGNYKQVLRRVR 209
Fly 210 KSVDNRIVVVGSSETMPEFLNQA---QQVGIINEDYKYIIGNLDFHSFDLEEYKYSEANITGLRL 271
Fly 272 FSPEKMAVKELLMKLGYPTDQDEFRNGSCPITVEMALTYDAVQLFAQTLKNLPFKPMPQNCSQRT 336
Fly 337 ESVR---------------DDGSSFKNYMRTLRLTDRLLTGPIYF-EGNVRKGYHLDVIELQPSG 385
Fly 386 IVKVGTWDEDRQYRPQRLAP--TTAQFDSVDNSLANKTFIILLSVPNKPYAQLVETYKQLEGNSQ 448
Fly 449 YEGYGVDLIKELADKLGFNF--TFVNGGNDYGSYNKSTNESTGMLREIMTGRADLAITDLTITSE 511
Fly 512 REQALDFTIPFMNLGIAILYLKPQKATPELFTFMDPFSEEVWWFLGFSFLGVSLSFFILGRLSPS 576
Fly 577 EWDNPYPCIEEPEE--------LENQFTLGNSIWFTTGALLQQGSEIGPKALSTRTVASFWWFFT 633
Fly 634 LIVVSSYTANLAAFLTIEKPQSLINSVDDLADNKDGVVYGAKKTGSTRNFFMTSAEERYKKMNKF 698
Fly 699 M-SENPQYLTEDNMEGVNRV-KTNTHYAFLMESTSIEYNTKRE-CNLKKIGDALDEKGYGIAMRK 760
Fly 761 DWPHRGKFNNALLELQEQGVLEKMKNKWWNEVGTGICATKED-APDAT-PLDMNNLEGVFFVLLV 823
Fly 824 GSCCALLYGIISW 836 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIE | NP_001036733.1 | PBP1_iGluR_Kainate | 42..396 | CDD:107377 | 88/373 (24%) |
ANF_receptor | 51..382 | CDD:279440 | 81/350 (23%) | ||
PBP2_iGluR_Kainate | 419..790 | CDD:270432 | 174/383 (45%) | ||
Lig_chan | 551..824 | CDD:278489 | 129/285 (45%) | ||
gria1 | XP_004912781.1 | PBP1_iGluR_AMPA_GluR1 | 26..393 | CDD:380613 | 97/401 (24%) |
PBP2_iGluR_AMPA_GluR1 | 407..788 | CDD:270447 | 176/390 (45%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |