Sequence 1: | NP_001036733.1 | Gene: | GluRIIE / 318623 | FlyBaseID: | FBgn0051201 | Length: | 897 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001352716.1 | Gene: | grin2ca / 100003342 | ZFINID: | ZDB-GENE-070822-3 | Length: | 1400 | Species: | Danio rerio |
Alignment Length: | 906 | Identity: | 207/906 - (22%) |
---|---|---|---|
Similarity: | 379/906 - (41%) | Gaps: | 193/906 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 98 IAGVFGPSSRHTAVHLMSIC--DAMDIPHIYSYMSENAEGFNLHPHPADLAKALYSLITEFNWTR 160
Fly 161 FIFL------YES-AEYLNILNELTTMLGKSGTVITVLRYDMQLNGNYKQVLRRVRKSVDNRIVV 218
Fly 219 VGSSETMPEFL-NQAQQVGIINEDYKYIIGNLDFHSFDLEEYKYSEANITGLRLFSPEKMAVKEL 282
Fly 283 LMKLGYPTD------QDEFRNGSCPITVEMALTYDAVQLFAQTLKNL---------PFKPMPQNC 332
Fly 333 SQR---TESVRDDGSSFKNYMRTLRLTDRLLTGPIYFEGNVRKGYHLDVIELQPSGIVKV----- 389
Fly 390 ---GTWDE---DRQY--------RP----QRLAPTTAQFDSVDNSL-----ANKTFIILLSVPNK 431
Fly 432 PYAQLVETYKQLEGNSQYEGYGVDLIKELADKLGFNFTF---VNGGND---YGSYNKSTNESTGM 490
Fly 491 LREIMTGRADLAITDLTITSEREQALDFTIPFMNLGIAILYLKPQKATPELFTFMDPFSEEVWWF 555
Fly 556 LGFSFLG-VSLSFFILGRLSPSEWDNPYPCIEEPEELENQFTLGNSIWFTTGALLQQGSEI-GPK 618
Fly 619 ALSTRTVASFWWFFTLIVVSSYTANLAAFLTIEKPQSLINSVDDLADNK--------DGVVYGAK 675
Fly 676 KTGST-RNFFMTSAEERYKKMNKFMSENPQYLTEDNMEGVNRVKTNTHYAFLMESTSIEYNTKRE 739
Fly 740 --CNLKKIGD--ALDEKGYGIAMRKDWPHRGKFNNALLELQEQGVLEKMKNKWWNEVGTGICATK 800
Fly 801 EDAPDATPLDMNNLEGVFFVLLVGSCCALLYGIISWVLFVMKKAHHYRVPLRDALKEEFQFVID- 864
Fly 865 -----FN-----------------------NYVRVLKNSASIYSRSR-QSSMSVASVAQES 896 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIE | NP_001036733.1 | PBP1_iGluR_Kainate | 42..396 | CDD:107377 | 61/336 (18%) |
ANF_receptor | 51..382 | CDD:279440 | 55/311 (18%) | ||
PBP2_iGluR_Kainate | 419..790 | CDD:270432 | 109/391 (28%) | ||
Lig_chan | 551..824 | CDD:278489 | 82/287 (29%) | ||
grin2ca | NP_001352716.1 | PBP1_iGluR_NMDA_NR2 | 38..398 | CDD:107373 | 58/325 (18%) |
PBP2_iGluR_NMDA_Nr2 | 409..810 | CDD:270436 | 118/440 (27%) | ||
NMDAR2_C | 847..>938 | CDD:313729 | 15/89 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170591322 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |