DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15369 and Cst3

DIOPT Version :9

Sequence 1:NP_001285041.1 Gene:CG15369 / 31862 FlyBaseID:FBgn0030105 Length:122 Species:Drosophila melanogaster
Sequence 2:NP_036969.1 Gene:Cst3 / 25307 RGDID:2432 Length:140 Species:Rattus norvegicus


Alignment Length:122 Identity:32/122 - (26%)
Similarity:56/122 - (45%) Gaps:24/122 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ILILCTACVLVSAT----PFGLGAPKVLEGEDLASAQQTLEASLTKLAAG--EGPHYRLSKILSA 64
            :|:|....|..:.|    |..||||:..:..: ...|:.|:.::::...|  :..|.|..:::.|
  Rat     9 MLLLAVLAVAWAGTSRPPPRLLGAPQEADASE-EGVQRALDFAVSEYNKGSNDAYHSRAIQVVRA 72

  Fly    65 TSQVVSGFKNDYSVELIDNQGATKVCQVDIWSQSWLPNGIQVTFRCP--NEPELVRK 119
            ..|:|:|......||:    |.|...:    ||:.|.|       ||  ::|.|:||
  Rat    73 RKQLVAGINYYLDVEM----GRTTCTK----SQTNLTN-------CPFHDQPHLMRK 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15369NP_001285041.1 CY 24..110 CDD:238002 20/87 (23%)
Cst3NP_036969.1 CY 28..138 CDD:214484 27/103 (26%)
Secondary area of contact 75..79 2/3 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1565344at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.