Protein Alignment Slimp and SRS

DIOPT Version :9

• Sequence 1: NP_732958.1
• Gene: Slimp / 318604
• FlyBaseID: FBgn0051133
• Length: 464
• Species: Drosophila melanogaster
• Sequence 2: NP_849647.1
• Gene: SRS / 837734
• AraportID: AT1G11870
• Length: 514
• Species: Arabidopsis thaliana
• Alignment Length: 481
• Identity: 113/481 - (23%)
• Similarity: 200/481 - (41%)
• Gaps: 79/481 - (16%)

  Fly    27 ITGDKANENYVTLQPY----MDFNKTFGERQFLEQSISSRGLDIRLETVLSKYEKYKTHHAQLSK 87
            |...:.:::.|..:|.    :||......::.:|.:|.:|..:..||.||..||.......::.:
plant    59 IPATQTSDSSVAARPLWKAAIDFKWIRDNKEAVEINIRNRNSNANLEAVLQLYENMVNLQKEVER 123

  Fly    88 VAEERERVTKRLK-ELTKSGSSAVQLEELKEHGKSLRNELKALKQTLYPIEDDFIHDYLHLPNLL 151
            :.|||..|.|::| :|..|     :.|.|.|.||:|:..|..|::.|..::|:..|....:||:.
plant   124 LREERNNVAKKMKGKLEPS-----ERERLVEEGKNLKESLVTLEEDLVKLKDELQHVAQSIPNMT 183

  Fly   152 HVQCPVGGEEKLLYRH--GIPKSEN-KTTSHLARQELVHFVD---------NNRYYLMEQAALFD 204
            |...|||||:....|.  |.|:..: ....||...:.:..:|         :..:||..:|.|.:
plant   184 HPDVPVGGEDSSAIRQEVGSPREFSFPIKDHLQLGKDLDLIDFDSAAEVSGSKFFYLKNEAVLLE 248

  Fly   205 VNAMQSLARYFVNHGHFIQTANPDFVRCVLLE-ANATPLSD----YHLVQEEHLQNKINTAYL-T 263
            :..:.......:..| :.....|:.||..::| ....|..|    |.:...:  |..|.||.: .
plant   249 MALLNWTLSQVMKKG-YTPLTTPEIVRSSIVEKCGFQPRGDNTQVYSIDGTD--QCLIGTAEIPV 310

  Fly   264 GGASFESYLGAMTKLCVYPSVLPLRYVCCGRSYNRAEADLYG-PIPSLYTATQTNAVQIFVATQT 327
            ||...:|.|        ..|.|||:|:.....: |.||...| ....||...|.:..::||..|.
plant   311 GGIHMDSIL--------LESALPLKYIAFSHCF-RTEAGAAGAATKGLYRVHQFSKAEMFVICQP 366

  Fly   328 DNEADSQLEHILNLATDFYKALDIPFRISYATAADLTPAESIRAVIEVYAPSLQRYVCVGRISNY 392
            : :::|..:.::.:..|.:.:|.:.|:......|||......:..||.:.|.|.|:..:...||.
plant   367 E-DSESFHQELIQIEEDLFTSLGLHFKTLDMATADLGAPAYRKFDIEAWMPGLGRFGEISSASNC 430

  Fly   393 GDFVSKRI--------------------LFSTRREKHYDFLHMVGGPVLYTSRLIAALVEHGVRL 437
            .|:.|:|:                    |.:|:      |:|.:........|::..|:|: .:.
plant   431 TDYQSRRLGIRYRPSEPPQTGPKKGKANLPATK------FVHTLNATACAVPRMMVCLLEN-YQQ 488

  Fly   438 EDCKL---------LGSISQ-KPVHQ 453
            ||..:         :|.|.. ||.|:
plant   489 EDGSVVIPEPLRPFMGGIELIKPKHK 514

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Slimp	NP_732958.1	serS	43..433	CDD:273066	102/429 (24%)
		Seryl_tRNA_N	51..150	CDD:299883	29/99 (29%)
		class_II_aaRS-like_core	194..433	CDD:294192	58/265 (22%)
SRS	NP_849647.1	PLN02320	17..514	CDD:177954	112/479 (23%)
		Seryl_tRNA_N	79..182	CDD:280549	31/107 (29%)
		SerRS_core	197..503	CDD:238393	67/325 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	49	1.000	Domainoid score	I4473
eggNOG	1	0.900	-	-		E1_COG0172
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11778
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	6	5.870