DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slimp and SARS2

DIOPT Version :9

Sequence 1:NP_732958.1 Gene:Slimp / 318604 FlyBaseID:FBgn0051133 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_001139373.1 Gene:SARS2 / 54938 HGNCID:17697 Length:520 Species:Homo sapiens


Alignment Length:473 Identity:119/473 - (25%)
Similarity:179/473 - (37%) Gaps:54/473 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 TCSRNISALYITGDKANENYVTLQPYMDFNKTFGERQFLEQSISSRGLDIR---LETVLSKYEKY 78
            |..||.:.||   :.|.|.|..| |.:|..:.....:....::..|..::|   |..::|.:::.
Human    36 TEKRNRNLLY---EYAREGYSAL-PQLDIERFCACPEEAAHALELRKGELRSADLPAIISTWQEL 96

  Fly    79 KTHHAQLSKVAEERERVTKRLKE-LTKSGSSAVQLEELKEHGKSL--------RNELKALKQTLY 134
            :....|:..:.||:..||:.::. |....|..||...|.....|:        ..:|..|.:.  
Human    97 RQLQEQIRSLEEEKAAVTEAVRALLANQDSGEVQQVRLDPGAGSIFGPTFLPFPGQLSLLVEA-- 159

  Fly   135 PIEDDFIHDYLHLPNLLHVQCPVGGEEKLLYRHGI---PKSENKTTSHL--------ARQELVHF 188
            .:|:.|....|.|||..|...|||.|.:....|.:   |....:...||        .||:.:..
Human   160 QLEEQFYLQALKLPNQTHPDVPVGDESQARVLHMVGDKPVFSFQPRGHLEIGEKLDIIRQKRLSH 224

  Fly   189 VDNNR-YYLMEQAALFDVNAMQSLARYFVNHGHFIQTANPDFVRCVLLEA-----NATPLSDYHL 247
            |..:| |||....||.....:.......:..| |.....||.:|..:.|.     ||.|...|::
Human   225 VSGHRSYYLRGAGALLQHGLVNFTFNKLLRRG-FTPMTVPDLLRGAVFEGCGMTPNANPSQIYNI 288

  Fly   248 VQEEHLQ-NKINTAYLTGGASFESYLGAMTKLCVYPSVLPLRYVCCGRSYNRAEADLYGPIPSLY 311
            ....... |...||.:.....|..:..|...       ||:|.||....| |||.:.......||
Human   289 DPARFKDLNLAGTAEVGLAGYFMDHTVAFRD-------LPVRMVCSSTCY-RAETNTGQEPRGLY 345

  Fly   312 TATQTNAVQIFVATQTDNEADSQ-LEHILNLATDFYKALDIPFRISYATAADLTPAESIRAVIEV 375
            .......|::|..|....|..|| ||..|:|..:....|.:.||:......:|......:..||.
Human   346 RVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEA 410

  Fly   376 YAPSLQRYVCVGRISNYGDFVSKR--ILFSTRREKHYDFLHMVGGPVLYTSRLIAALVEHGVRLE 438
            :.|...|:..|...||..||.|:|  |:|.|...: ..|.|.|........||:.||:|...:.:
Human   411 WMPGRGRFGEVTSASNCTDFQSRRLHIMFQTEAGE-LQFAHTVNATACAVPRLLIALLESNQQKD 474

  Fly   439 DCKLLGSISQKPVHQQDL 456
                 ||:...|..|..|
Human   475 -----GSVLVPPALQSYL 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlimpNP_732958.1 serS 43..433 CDD:273066 103/422 (24%)
Seryl_tRNA_N 51..150 CDD:299883 22/110 (20%)
class_II_aaRS-like_core 194..433 CDD:294192 66/247 (27%)
SARS2NP_001139373.1 PRK05431 58..495 CDD:235461 109/447 (24%)
SerRS_core 187..487 CDD:238393 79/314 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0172
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11778
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

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