DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slimp and sars1

DIOPT Version :10

Sequence 1:NP_732958.1 Gene:Slimp / 318604 FlyBaseID:FBgn0051133 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_001003882.1 Gene:sars1 / 445405 ZFINID:ZDB-GENE-040831-1 Length:515 Species:Danio rerio


Alignment Length:501 Identity:102/501 - (20%)
Similarity:195/501 - (38%) Gaps:125/501 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AKKTCSRNISALYITGDKANENYVTLQPYMDFNKTFGERQFLEQSISSRGLDIRLETVLSKYEKY 78
            ||..||::|      |:|..:.    :|..|.:....|.|.|| ::::..|.....|        
Zfish    56 AKNLCSKSI------GEKMKKK----EPVGDDDTLPEEAQNLE-ALTAETLSPLTVT-------- 101

  Fly    79 KTHHAQLSKVAEERERVTKRLKELTKSGSSAVQLEELKEHGKSLRNELKALKQTLYPIEDDFIHD 143
                 |:.||                    .|.::|..:...|.|.:|:|.:           .:
Zfish   102 -----QIKKV--------------------RVLVDEAVQKTDSDRLKLEAER-----------FE 130

  Fly   144 YL-HLPNLLHVQCPVGGEEKLLYRHGIPKSENKTT------------SHLARQELVHFVD----- 190
            || .:.||||...|:..:|         .::||..            ||:   :||..||     
Zfish   131 YLREIGNLLHPSVPISNDE---------DADNKVERTWGDCTVQKKYSHV---DLVVMVDGYEGE 183

  Fly   191 ------NNRYYLMEQAALFDVNAMQSLARYFVNHGHFIQTANPDFVRCVLLEANATPLSD----- 244
                  .:|.|.::...:|...|:.:.|...:...::.....|.|:|..::: ....||.     
Zfish   184 KGAIVAGSRGYFLKGPLVFLEQALINYALRILYSKNYNLLYTPFFMRKEVMQ-EVAQLSQFDEEL 247

  Fly   245 YHLV---QEEHLQNKINTAYLTGGASFESYLGAMTK-LCVYPSVLPLRYVCCGRSYNRAEADLYG 305
            |.::   .|:...|.::..||.  |:.|..:.|..: ..:.|..||:||......: |.|...:|
Zfish   248 YKVIGKGSEKSDDNTVDEKYLI--ATSEQPIAAFLRDEWLKPEELPIRYAGLSTCF-RQEVGSHG 309

  Fly   306 -PIPSLYTATQTNAVQIFV-ATQTDNEADSQLEHILNLATDFYKALDIPFRISYATAADLTPAES 368
             ....::...|...::.|| |:..|.::....:.::..|..||:.|.||:||....:..|..|.|
Zfish   310 RDTRGIFRVHQFEKIEQFVYASPHDGKSWEMFDEMIGTAESFYQTLGIPYRIVNIVSGALNHAAS 374

  Fly   369 IRAVIEVYAPSLQRYVCVGRISNYGDFVSKRILFSTRREKHY----DFLHMVGGPVLYTSRLIAA 429
            .:..:|.:.|..|.:..:...||..|:.::|:.....:.|..    :|:||:...:..|:|:|.|
Zfish   375 KKLDLEAWFPGSQAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKAEFVHMLNATMCATTRVICA 439

  Fly   430 LVEH-----GVRLED----------CKLLGSISQKPVHQQDLQQFK 460
            ::|:     |:.:.:          .:::..:...|:.|:..::.|
Zfish   440 ILENFQTEEGIIVPEPLKAFMPPGLTEIIKFVKPAPIDQETTKKQK 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlimpNP_732958.1 PLN02320 43..400 CDD:177954 80/391 (20%)
sars1NP_001003882.1 PLN02678 3..475 CDD:215364 99/489 (20%)
Interaction with tRNA. /evidence=ECO:0000250|UniProtKB:P49591 9..61 2/4 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 475..515 3/11 (27%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:P49591 482..494 1/4 (25%)

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