Protein Alignment Slimp and SerRS

DIOPT Version :9

• Sequence 1: NP_732958.1
• Gene: Slimp / 318604
• FlyBaseID: FBgn0051133
• Length: 464
• Species: Drosophila melanogaster
• Sequence 2: NP_001259982.1
• Gene: SerRS / 33518
• FlyBaseID: FBgn0031497
• Length: 501
• Species: Drosophila melanogaster
• Alignment Length: 447
• Identity: 94/447 - (21%)
• Similarity: 177/447 - (39%)
• Gaps: 81/447 - (18%)

  Fly    50 GERQFLEQSISSRGLDIRL-ETVLSKYEKYK--THHAQ--------LSKVAEERER--------- 94
            |....:.::...|..|:.| |||::|..:::  .|.|.        .|||..|:.:
  Fly    14 GNPDLVRENQKKRFKDVALVETVIAKDTEWRQCRHRADNLNKVKNVCSKVIGEKMKKKEPVGAMS 78

  Fly    95 ------VTKRLKELTKSGSSAVQLEELKEHGKSLRNELKALKQTLYPIEDDFIHDYLHLPNLLHV 153
                  |||.|.|:.......:.:.::|:....:.:.:...:::|...|.........:.|.||.
  Fly    79 EDLPADVTKDLTEIVAETLQPLTVNQIKQLRVLIDDAMTENQKSLELAEQTRNTSLREVGNHLHE 143

  Fly   154 QCPVGGEEKLLYRHGIPKSENKTT------------SHLARQELVHFVD-----------NNRYY 195
            ..||..:|          .||:..            ||:   :|:..:|           ..|.|
  Fly   144 SVPVSNDE----------DENRVERTFGDCEKRGKYSHV---DLIVMIDGMNAEKGAVVSGGRGY 195

  Fly   196 LMEQAALFDVNAMQSLARYFVNHGHFIQTANPDFVRCVLLEANATPLSD-----YHLV---QEEH 252
            .:..||:|...|:...|.:.:....::....|.|:|..::: ....||.     |.:|   .|:.
  Fly   196 FLTGAAVFLEQALIQHALHLLYARDYVPLYTPFFMRKEVMQ-EVAQLSQFDEELYKVVGKGSEKA 259

  Fly   253 LQNKINTAYLTGGASFESYLGAMTKLCVYP-SVLPLRYVCCGRSYNRAEADLYG-PIPSLYTATQ 315
            .:..|:..||.  |:.|..:.|..:....| |.||::|......: |.|...:| ....::...|
  Fly   260 EEVGIDEKYLI--ATSEQPIAAYHRDEWLPESSLPIKYAGLSTCF-RQEVGSHGRDTRGIFRVHQ 321

  Fly   316 TNAVQIFVATQT-DNEADSQLEHILNLATDFYKALDIPFRISYATAADLTPAESIRAVIEVYAPS 379
            ...|:.||.|.. ||::...::.::..|..|.::|.||:|:....:..|..|.|.:..:|.:...
  Fly   322 FEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIVSGALNHAASKKLDLEAWFGG 386

  Fly   380 LQRYVCVGRISNYGDFVSKRILFSTRREKH----YDFLHMVGGPVLYTSRLIAALVE 432
            ...|..:...||..|:.::|:|....:.|.    .|::||:...:...:|:|.|::|
  Fly   387 SGAYRELVSCSNCLDYQARRLLVRFGQTKKMNAAVDYVHMLNATMCAATRVICAILE 443

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Slimp	NP_732958.1	serS	43..433	CDD:273066	94/447 (21%)
		Seryl_tRNA_N	51..150	CDD:299883	21/124 (17%)
		class_II_aaRS-like_core	194..433	CDD:294192	59/254 (23%)
SerRS	NP_001259982.1	PLN02678	3..476	CDD:215364	94/447 (21%)
		Seryl_tRNA_N	3..111	CDD:280549	20/96 (21%)
		SerRS_core	153..461	CDD:238393	66/298 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45452775
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0172
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.740