DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slimp and sars2

DIOPT Version :10

Sequence 1:NP_732958.1 Gene:Slimp / 318604 FlyBaseID:FBgn0051133 Length:464 Species:Drosophila melanogaster
Sequence 2:XP_002940400.1 Gene:sars2 / 100485850 XenbaseID:XB-GENE-969286 Length:505 Species:Xenopus tropicalis


Alignment Length:477 Identity:119/477 - (24%)
Similarity:192/477 - (40%) Gaps:60/477 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KHCLSAKKTCSRNISALYITGDKANENYVTLQPYMDF-----NKTFGERQFLEQSISSRGLDIR- 67
            |.......|..|  |.||   |...:.| :.:|.:|.     :....||::||:...||..::: 
 Frog    21 KRAFCTSGTVDR--SRLY---DHVRDGY-SAKPQLDMETLTRDLEAAEREYLERKSGSRHGELKE 79

  Fly    68 LETVLSKYEKYKTHHAQLSKVAEERERVTKRLKELTKSGSSAVQLEE------------LKEHGK 120
            :..:.::.||.|   .::..:.||:..:.|.:|.:..|       ||            :::.||
 Frog    80 VIAIWNRLEKVK---QEIKTLEEEKSAIAKEVKHMVIS-------EEKQNLQTNPRYALIRKRGK 134

  Fly   121 SLRNELKALKQTLYPIEDDFIHDYLHLPNLLHVQCPVGGEEK--LLYRHGI-PKSENKTTSHL-- 180
            .:|.||..|.:....:|..|....|.|||..|...|||.|.|  :|...|: |:.:.|...||  
 Frog   135 DIRLELSTLYKEESNLEGSFYPRALRLPNRTHPNTPVGDESKARVLEVVGVKPEFDFKICGHLEI 199

  Fly   181 -------ARQELVHFVDNNRYYLMEQAALFDVNAMQSLARYFVNHGHFIQTANPDFVRCVLLEAN 238
                   .::.|.|...:..|||....:|.....:.......|..| ||..:.||.:|..:.|..
 Frog   200 GEDLDIIRQRRLSHVSGHRSYYLRGAGSLLQHALVNFTISKLVKKG-FIPMSVPDMLRGAVFEGC 263

  Fly   239 ATPLSDYHLVQ---EEHLQN-KINTAYLTGGASFESYLGAMTKLCVYPSVLPLRYVCCGRSYNRA 299
            ... :|.|..|   .:.||: .:|.|    |.|.....|......|....||:|.|||...| ||
 Frog   264 GMQ-ADAHASQVYSVDPLQHPDLNLA----GTSEVGIAGFFMDHAVMLQDLPVRTVCCSTCY-RA 322

  Fly   300 EADLYGPIPSLYTATQTNAVQIFVATQTDNEADSQ--LEHILNLATDFYKALDIPFRISYATAAD 362
            |.|.......||.......|::|..|..::..:||  |:..|.|..:.:..|.:.|::......:
 Frog   323 ETDTGRETWGLYRVHHFTKVEMFGVTANESGIESQEMLDEFLGLQKEIFSELGLHFKVLEMPTQE 387

  Fly   363 LTPAESIRAVIEVYAPSLQRYVCVGRISNYGDFVSKRI-LFSTRREKHYDFLHMVGGPVLYTSRL 426
            |......:..||.:.|...:|..:...||..|:.|:|: :...|::......|.|.|......||
 Frog   388 LGLPAYRKYDIEAWMPGRGKYGEISSTSNCTDYQSRRLNIMYQRQDGELRHAHTVNGTACAVPRL 452

  Fly   427 IAALVEHGVRLEDCKLLGSISQ 448
            :.|::|...|.:...|:..:.|
 Frog   453 LIAILESNQRKDGAVLIPEVLQ 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlimpNP_732958.1 PLN02320 43..400 CDD:177954 98/392 (25%)
sars2XP_002940400.1 SerRS_core 177..477 CDD:238393 75/305 (25%)

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