DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wsck and Fgfr1

DIOPT Version :9

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_077060.1 Gene:Fgfr1 / 79114 RGDID:620713 Length:822 Species:Rattus norvegicus


Alignment Length:442 Identity:94/442 - (21%)
Similarity:185/442 - (41%) Gaps:107/442 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   404 ALAVTCVIFGSCLLLSLIAYFYLRYKTCRGRRLTGGNT----HEMTLQTPIIERE---------- 454
            |..::|:: ||.::          ||...|.:.:..::    |::....| :.|:          
  Rat   384 AFLISCMV-GSVII----------YKMKSGTKKSDFHSQMAVHKLAKSIP-LRRQVTVSADSSAS 436

  Fly   455 -NNGYL-----------------VEDDPLPHSPENFKQQLQQLVEGYERIPRNALRLNVNDVIGD 501
             |:|.|                 |.:..||..|.            :| :||:  ||.:...:|:
  Rat   437 MNSGVLLVRPSRLSSSGTPMLAGVSEYELPEDPR------------WE-LPRD--RLVLGKPLGE 486

  Fly   502 GRFGEIITG--------------KVSTNDFARDCTLHVLCLDDLNGTTQAQLLRELRQLSQLKRQ 552
            |.||:::..              ||:......|.|...|          :.|:.|:..:..:.:.
  Rat   487 GCFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL----------SDLISEMEMMKMIGKH 541

  Fly   553 EHLLDFYGVSASPDWFYLIFEQQRMSLKRKLVESR-------LMAPS--PRLTSLSEQLVLQWIY 608
            :::::..|........|:|.|.......|:.:::|       ...||  |. ..||.:.::...|
  Rat   542 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE-EQLSSKDLVSCAY 605

  Fly   609 ELASAMNYLSSCQVVHRQLCSHSVFVTSDFKLKLSVFG---PLPYMNIARQQPDHN---RWLAPE 667
            ::|..|.||:|.:.:||.|.:.:|.||.|..:|::.||   .:.:::..::..:..   :|:|||
  Rat   606 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 670

  Fly   668 VLRHQHHHSTRSDVWSLACVAWECCALGGTPYANAVASNQQLLEAIRAAVRPAQPAYVYGDLYQL 732
            .| ....::.:|||||...:.||...|||:|  |.....::|.:.::...|..:|:....:||.:
  Rat   671 AL-FDRIYTHQSDVWSFGVLLWEIFTLGGSP--NPGVPVEELFKLLKEGHRMDKPSNCTNELYMM 732

  Fly   733 LLNCWQLEPSERSSCEDVAFGVRQL--MTSPRHALSFDRVAGGLDTLPPYLP 782
            :.:||...||:|.:.:.:...:.::  :||.:..|.   ::..||...|..|
  Rat   733 MRDCWNAVPSQRPTFKQLVEDLDRIVALTSNQEYLD---LSMPLDQDSPSFP 781

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:280068
fn3 130..222 CDD:278470
TyrKc 493..746 CDD:197581 66/281 (23%)
PTKc 497..750 CDD:270623 65/281 (23%)
Fgfr1NP_077060.1 Ig1_FGFR 40..118 CDD:143174
IG_like 41..118 CDD:214653
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..162
I-set 160..247 CDD:254352
Heparin-binding 160..177
Ig2_FGFR 163..247 CDD:143265
IG_like 262..358 CDD:214653
Ig3_FGFR 270..359 CDD:143175
PTKc_FGFR1 464..765 CDD:270678 75/329 (23%)
Pkinase_Tyr 478..754 CDD:285015 66/289 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 770..822 4/12 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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