DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wsck and flt3

DIOPT Version :9

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:XP_001921760.3 Gene:flt3 / 566708 ZFINID:ZDB-GENE-050114-4 Length:956 Species:Danio rerio


Alignment Length:838 Identity:161/838 - (19%)
Similarity:299/838 - (35%) Gaps:225/838 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 CYTARTDLLHESVYAKTP-----------QTCIEICEHQGHHYAVLASEKCFCANVLEPQEQQDE 98
            |.|..|.:.:.|..:|.|           :.|.|:     :||.:....|....|::..:..|..
Zfish   170 CKTESTLISYYSYLSKNPNQKCCASNALGEECTEV-----YHYDLNEKNKQKSQNIIYLKSGQSL 229

  Fly    99 QLCNTRCLANKAQYCGGVGVHSYYSTILTKQPGPHHLRISNKTENSLTLSWNAYEARKLLLAGGA 163
            .|...|      ::....|:..:::..:.|  |...|:..:.||:....|.|...:...|.....
Zfish   230 LLRAAR------KHFKNPGIKWHFNNTVIK--GITSLQFYDWTEHLFIESVNMAHSGLYLCTSDT 286

  Fly   164 EAVLPN------QLLDNFLIKAQVLKTYSSLPAFPQPEFMVQSTETQFELTDLHPATLYNISVRA 222
            |.  |.      ::.::..|....|...:|:.|..:..|..||....:.              :|
Zfish   287 ET--PRNCSTHVKVFEHDQIDILHLNENNSILAKNKTGFCFQSQVFSYP--------------KA 335

  Fly   223 MC-----KDAQVGQSECGQASIEATTEVGLPSPVPAQPKILSRTDRTVTIELSPIRNDNGPLSKL 282
            .|     ...|:...|..|::..:|.::....|...|.|:       .|.|.|.:||.:..:|.:
Zfish   336 RCYWITPNQTQIQCDETSQSNFTSTFKLCNTEPGQYQMKL-------ETQEYSVMRNVSLCISDI 393

  Fly   283 LVIV-----EYVDNALSQPFDAQLLGSWQQ----AQQDGVPYYIAAELDYDRPEDNRTRRFVVGD 338
            ..|.     .:.......|....:  ||:.    |:.|...:   .|:..|:||...:.:|.   
Zfish   394 PKITIRKNSSFTTCETESPLPVTV--SWKTCPSLAKCDPEDW---KEIAADQPEFTDSDQFC--- 450

  Fly   339 GKRYGRFTNKPLDQPDAHVHISLGLVSTLEGVTKTMYSRGTHDQHVTSLDDFSYATFEKGQSSVV 403
            .|:.| |:.:.|...|   |:....::.:.|.       |..::.:......:|        .|:
Zfish   451 QKKIG-FSRRHLKSED---HLIKCCITNVAGT-------GCSEKILLQTKSHTY--------YVI 496

  Fly   404 ALAVTCVIFGSCLLLSLIAYFYLRYKTCRGRRLTGGNTHEMTLQ-TPIIERENNGYLVEDDPLPH 467
            ...:..::|  .::::||  .::|.|..:         ::..:| ..:|...:|.|:..|.    
Zfish   497 CFLLIVILF--MIIIALI--IFIRVKKPK---------YQSQIQMIQMIGPNDNDYIYIDF---- 544

  Fly   468 SPENFKQQLQQLVEGYERIPRNALRLNVNDVIGDGRFGEIITGK---VSTNDFARDCTLHVLCLD 529
              ..||..|:.      ..||..|.|  .:.:|.|.||.::...   :|....:....:.:| .:
Zfish   545 --REFKYDLKW------EFPRENLEL--GNELGSGAFGMVVQATAYGISKPGVSVQVAVKML-KE 598

  Fly   530 DLNGTTQAQLLRELRQLSQLKRQEHLLDFYGVSASPDWFYLI----------------------- 571
            ......:..|:.||:.|:.:...|::::..|........|||                       
Zfish   599 KHQAVEKEALMSELKMLTHIGHHENIVNLLGACTGSGPIYLIFQFCCNGDLLNYLKSNRECFHKY 663

  Fly   572 ----------------FEQQRMSLK-----------------------RKLVESRLMAPSP---- 593
                            |:|.|.|.:                       ..|:.|.:.:.||    
Zfish   664 LTDAFNKDRFRGLYHNFQQNRNSSEYVLSDNSQCLNVTPASKEQENENDALLSSSISSGSPAEEM 728

  Fly   594 ----------RLTSLSEQLVLQWIYELASAMNYLSSCQVVHRQLCSHSVFVTSDFKLKLSVFGPL 648
                      .|.||:...:|.:.:::|..|.:||:...:||.|.:.:|.||...::|::.||  
Zfish   729 LECEDEHQEEELHSLTYDDLLSFSFQVAKGMQFLSAKNCIHRDLAARNVLVTHGRQVKIADFG-- 791

  Fly   649 PYMNIARQ-QPDHN-----------RWLAPEVLRHQHHHSTRSDVWSLACVAWECCALGGTPYAN 701
                :||. :.|.|           :|:|||.: .:..::..||:|:...:.||..:||.|||. 
Zfish   792 ----LARDIEHDSNYVVRGNVRLPVKWMAPESI-FKGIYTMESDIWAYGILLWEIFSLGVTPYP- 850

  Fly   702 AVASNQQLLEAIRAAVRPAQPAYVYGDLYQLLLNCWQLEPSERSSC--EDVAFGVRQL 757
            .|..|......|.:.....||.|....:|:::..||.|.|.:| .|  :.|||..::|
Zfish   851 GVTVNNTFYRMIESGYHLEQPYYAAESVYKVMCRCWALNPVDR-PCFSKIVAFMEKEL 907

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:280068 15/80 (19%)
fn3 130..222 CDD:278470 16/97 (16%)
TyrKc 493..746 CDD:197581 71/343 (21%)
PTKc 497..750 CDD:270623 71/345 (21%)
flt3XP_001921760.3 IGc2 225..283 CDD:197706 12/65 (18%)
PKc_like 522..907 CDD:328722 86/408 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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