DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wsck and ptprk

DIOPT Version :9

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:XP_021324239.1 Gene:ptprk / 555348 ZFINID:ZDB-GENE-030131-9834 Length:1500 Species:Danio rerio


Alignment Length:613 Identity:138/613 - (22%)
Similarity:223/613 - (36%) Gaps:147/613 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 AVPQEAPAYYYVGCYTARTDLLHESVYAKTPQ----TCIEICEHQGHHYA------VLASEKCFC 86
            ||..|:..|....|:|....:.:.  |.|||.    .|:|:......|..      ...|.|...
Zfish   406 AVDWESLGYNITRCHTFNVTICYH--YHKTPNHSKADCLEMDPKAPRHVVGNLPPNTNVSLKMIL 468

  Fly    87 ANVLEPQEQQDEQLCNTRCLANKAQYCGGVGVHSYYSTILTKQPGP---HHLRISNKTENSLTLS 148
            .|. |.:::.||.|..|:                      ...|||   ..:| |..:|:.::|.
Zfish   469 TNP-EGRKESDETLIQTQ----------------------EDVPGPVPKEFVR-STPSEDKISLQ 509

  Fly   149 WNAYEARKLLLAGGAEAVLPNQLLDNFLIKAQVLKTYSSL----PAFP--QPEFMVQS--TETQF 205
            |.             |.:.||.::..:.|      :|||:    |:.|  :|..:|..  ..:::
Zfish   510 WK-------------EPLEPNGIITQYEI------SYSSVHSFDPSVPLLRPPLLVSLPWNTSRY 555

  Fly   206 ELTDLHPATLYNISVRAMCKDAQVGQSECGQASIEATTEVGLPS--PVPAQPKILSRTDRTVTIE 268
            ..|.|||.|.|...:|     |...:......::..||.:..|:  ........|:.|..|:|:.
Zfish   556 NFTLLHPGTTYQFLIR-----ASTSKGFGPPTTLNVTTNISAPTLEEYDGSEASLNETATTITVL 615

  Fly   269 LSPIRNDNGPLSKLLVIVEYVD-----------NALSQPFDAQLLGSWQQAQQDGVPYYIAAELD 322
            |.|.:....|:|...::|:.::           ....:|.      |:|.|...|:|||.|||: 
Zfish   616 LKPAQAKGAPISAYQIVVKEINPHRGRREAGGGECYREPV------SYQSAVSSGLPYYFAAEI- 673

  Fly   323 YDRPEDN--RTRRFVVGDGKRYGRFTNKPLDQPDAHVHISLGLVSTLEGVTKTM-----YSRGTH 380
               |..|  ....|.|||.|.|..:.|.|| .|....:|....||.:|..:||.     :...|.
Zfish   674 ---PPRNLQEPLPFTVGDNKTYHGYWNAPL-APRKDYNIYFQAVSRVEKESKTQCLKLAFKGATE 734

  Fly   381 DQHVTSLDDFSYATFE----KGQSSVVALAVTCVIFGSCLLLSLIAYFYLRY--KTCRGRRLTGG 439
            :..|  :.|.:..|.:    .|.|:.|.:.:..|:....||....:|:...|  |..:.|:...|
Zfish   735 EPEV--IPDPAKQTDQVVKIAGISAAVLVFILLVLVAILLLKKRRSYYSYSYYLKLAKKRKDAIG 797

  Fly   440 NT-HEMTLQTPIIERE--NNGYLVEDDPLP---HSPENFKQQL--QQLVEGYERIP--------- 487
            || .|||.....::|.  :...|..::|:.   ....||..:|  :.||.....:|         
Zfish   798 NTRQEMTHMVNSMDRSYADQSTLHAEEPMTVTFMDSHNFSNRLPNEPLVPTAVLVPITDENHTAA 862

  Fly   488 ----RNALRLNVNDVIGDGRFGEIITGKVSTNDFARDCTLHVLCLDDLNGTTQAQLLRELRQLSQ 548
                .|:..|::.....:|......||::.......|...|:    :|..|:.:...:|      
Zfish   863 AAAAENSRLLDIPRYHCEGTESPYQTGQLHPAIRVADLLQHI----NLMKTSDSYGFKE------ 917

  Fly   549 LKRQEHLLDFYGVSASPDWFYLIFEQQR 576
                |:...|.|.|||  |.....||.|
Zfish   918 ----EYESFFEGQSAS--WDAAKKEQNR 939

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:280068 17/82 (21%)
fn3 130..222 CDD:278470 25/102 (25%)
TyrKc 493..746 CDD:197581 19/84 (23%)
PTKc 497..750 CDD:270623 18/80 (23%)
ptprkXP_021324239.1 MAM 30..191 CDD:214533
IG_like 201..282 CDD:214653
fn3 293..370 CDD:306538
fn3 491..582 CDD:306538 25/115 (22%)
PTPc 940..1195 CDD:238006 138/613 (23%)
PTPc 1257..1495 CDD:238006
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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